A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2660541



Internal ID9926646
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:41897032..41897593hg38UCSC Ensembl
chr6:41864770..41865331hg19UCSC Ensembl
Cytoband6p21.1
Allele length
AssemblyAllele length
hg38562
hg19562
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6587434, essv6149348, essv5950066, essv6055493, essv6229449, essv6343671, essv5923122, essv5716994, essv6234865, essv5574255, essv6387030, essv6277638, essv6200798, essv6030271, essv5776034, essv6156981, essv6536424, essv6348784, essv6308458, essv6409730, essv6312908, essv6204502, essv6413317, essv5519528, essv6419920, essv6438977, essv5728909, essv6375041, essv5903178, essv5989371, essv6271767, essv6263706, essv6586121, essv6453546, essv6353575, essv5471980, essv5944844, essv5538913, essv6167961, essv5724557, essv6344179, essv6028025, essv5576860, essv6089878, essv5563948, essv6424203, essv6053012, essv5585954, essv5494287, essv5568527, essv6218794, essv5494177, essv5889341, essv5878305, essv6141180, essv5913325, essv6110231, essv6112211, essv6209369, essv5866088, essv5815504, essv5784564, essv6446897, essv6413072, essv6178603, essv6305774, essv5611137, essv5556694, essv5701248, essv6271322, essv6191203, essv5560930, essv6317702, essv5926008, essv6327701, essv5436709, essv5638485, essv5599786, essv5761708, essv6277722, essv6282140, essv6263785, essv5650791, essv6022171, essv6443620, essv6249652, essv6217405, essv6150257, essv6477562, essv5975925, essv5920029, essv6243110, essv5792174, essv6279939, essv5693670, essv6178200, essv5886959, essv5762713, essv6269855, essv5612864, essv6054708, essv5858935, essv6447462, essv6503095, essv6294140, essv6191389, essv5405974, essv6371556, essv5878155, essv5705585, essv5774660, essv5982938, essv6340070, essv5712214, essv6091487, essv6115156, essv5936240, essv6558104, essv5398245, essv6075477, essv6190177, essv5912165, essv5953385, essv5690337, essv6404139, essv5716627, essv5451241, essv5938770, essv5834801, essv5808215, essv5907683, essv6054746, essv5861311, essv6216943, essv6542447, essv5548989, essv5434122, essv5897418, essv6010158, essv6567501, essv5650673, essv5561545, essv5808089, essv5582217, essv5577512, essv6485397, essv5813018, essv5793194, essv6368098, essv6582507, essv6591357, essv6202530, essv6119891, essv5540698, essv5670268, essv6420242, essv5980257, essv6159463, essv6013939, essv5429064, essv6538836, essv5705070, essv5457566, essv6354603, essv5481387, essv6578285, essv6442943, essv6598139, essv5436543, essv6079532, essv5882402, essv5659699, essv5628737, essv5618972, essv6087194, essv5924926, essv6098560, essv6123015, essv6311362, essv5800764, essv6283331, essv6248059, essv5678551, essv5607181, essv5909730, essv6192641, essv5887336, essv6067692, essv6207351, essv6026277, essv6042047, essv6021138, essv5743229, essv6130212, essv6136260, essv5796124, essv6152430, essv6223342, essv6283874, essv5808742, essv6020337, essv5427696, essv6267140, essv6554506, essv6329187, essv5526781, essv5944599, essv6489910, essv5886770, essv5885604, essv6523954, essv6108464, essv6396210, essv5861720, essv5856000, essv5608058, essv6535934, essv6041303, essv6221464, essv6267576, essv6380325, essv6445982, essv6080174, essv6378148, essv5629749, essv6201261, essv6035153, essv5946659, essv5771288, essv5478904, essv6519184, essv5570709, essv5567866, essv6547807, essv5463926, essv6255293, essv5722337, essv6273081, essv5552981, essv5596236, essv6029662, essv5623098, essv6589066, essv6574470, essv6091833, essv5931847, essv5488055, essv6486323, essv6094315, essv5813279, essv5711937
SamplesNA19394, HG00650, HG00442, HG01173, HG00608, NA18621, HG00671, HG00559, NA18565, HG00257, NA18999, HG00244, NA12340, NA18530, NA18616, HG00449, NA20517, HG00654, HG00261, NA20771, NA12750, NA12399, HG00693, HG00271, NA19446, HG00138, HG00589, NA18597, HG01351, NA18567, NA18558, HG01492, NA18574, NA07347, NA20768, NA18571, HG01365, HG00334, NA19904, HG00537, HG00243, HG00158, NA11930, NA19720, HG00335, HG00148, NA20812, HG00325, NA11994, HG00705, HG00118, NA18557, NA18985, HG01133, NA20757, HG00323, HG00253, NA20753, HG00137, HG00154, NA19908, HG00731, HG00443, HG00268, HG00282, NA19056, HG00245, NA20521, NA19717, HG00556, HG00583, NA18579, NA12718, NA18948, NA18548, HG00324, NA11919, HG00651, HG00250, NA19084, NA18626, HG00404, HG00531, HG00479, NA12829, HG00684, NA18532, NA18553, NA19059, NA19009, HG00146, NA18963, HG00704, HG00463, HG00126, HG01148, NA20799, NA18632, HG00254, HG00265, NA18628, HG01174, NA20527, HG00473, NA20792, HG00237, NA19679, HG01113, HG01137, NA20281, NA19360, NA18615, HG01342, HG00620, HG00259, NA20510, NA18636, NA18609, HG00280, NA20826, HG00377, HG00274, HG01125, NA19463, NA18623, NA19074, HG01437, HG00581, NA18577, NA19676, NA18620, HG01516, NA11830, HG00231, NA19397, HG00249, NA11829, NA18592, HG00100, HG01188, NA18599, HG01389, HG00306, HG00318, NA18486, HG01465, HG00699, NA18545, NA18596, NA18606, HG00179, HG00150, NA20507, NA12155, HG00327, NA19068, NA18550, HG01070, NA18595, HG00702, HG00448, NA20586, NA18982, NA18635, NA20769, HG00634, NA18942, HG00610, NA11992, NA19088, HG00247, NA19054, HG00369, HG00590, NA18611, HG00277, NA06984, HG01170, NA18560, HG00309, NA19725, NA18638, NA12748, HG00464, HG00133, HG00188, NA18544, HG01360, HG00183, HG00176, NA19082, NA19707, NA20787, HG00596, NA20524, HG00328, NA12342, NA20809, HG00577, HG00701, HG00436, HG00584, HG00533, NA18566, HG00273, HG00373, HG00117, HG00613, HG00321, NA12827, HG00276, HG00141, NA18634, NA19675, NA19436, HG00124, NA18542, NA18535, NA18559, HG00366, NA18950, HG00357, HG00136, NA07051, HG00607, HG00319, NA20516, NA07037, HG00256, NA06986, HG00125, NA19398, HG00707, HG00672, HG00578, HG00312, HG00421, HG00656, HG01055, HG00123, NA12830, HG00698, HG00343, NA20528, HG00372, HG01377, HG00472, NA19004, NA07000, NA18549, HG01191
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2660541
Frequency
Sample Size1151
Observed Gain0
Observed Loss251
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer