Variant Details

Variant: esv2660269

Internal ID

9579688

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr13:66823284..66825790	hg38	UCSC Ensembl
Outer	chr13:66822913..66826160	hg38	UCSC Ensembl
Inner	chr13:67397416..67399922	hg19	UCSC Ensembl
Outer	chr13:67397045..67400292	hg19	UCSC Ensembl

Cytoband

13q21.32

Allele length

Assembly	Allele length
hg38	3248
hg19	3248

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv6585862, essv5902529, essv5599529, essv6050012, essv6178031, essv6353015, essv6054723, essv5617534, essv5682423, essv6334204, essv6367677, essv5654110, essv6111904, essv5633137, essv5442858, essv5782050, essv6137608, essv5698313, essv5561428, essv5480286, essv5801411, essv5923944, essv5515791, essv6463574, essv5557623, essv6464075, essv5886254, essv6270497, essv6125463, essv5718371, essv5486917, essv5519164, essv6478045, essv6508833, essv5511341, essv6121466, essv5458428, essv6293370, essv6037978, essv6030284, essv6246225, essv5894444, essv5451449, essv6516950, essv5437828, essv6337826, essv5397856, essv5553710, essv6593098, essv6276073

Samples

HG00361, HG00187, HG00315, HG00306, HG00318, HG00337, HG00327, HG00271, HG00346, HG00369, HG00270, HG00334, HG00185, HG00311, HG00281, HG00277, HG00325, HG00309, HG00182, HG00326, HG00313, HG00188, HG00268, HG00328, HG00190, HG00368, HG00320, HG00344, HG00284, HG00273, HG00373, HG00331, HG00321, HG00276, HG00336, HG00285, HG00366, HG00353, HG00357, HG00278, HG00319, HG00312, HG00329, HG00310, HG00186, HG00280, HG00343, HG00372, HG00274, HG00171

Known Genes

PCDH9, PCDH9-AS2

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2660269

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	50
Observed Complex	0
Frequency	n/a