Variant Details

Variant: esv2659556

Internal ID

9578975

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr10:52255853..52258369	hg38	UCSC Ensembl
	chr10:54015613..54018129	hg19	UCSC Ensembl

Cytoband

10q21.1

Allele length

Assembly	Allele length
hg38	2517
hg19	2517

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

dgv140e199

Supporting Variants

essv6547805, essv6505127, essv6186220, essv6058158, essv5960538, essv5714698, essv5822900, essv6368443, essv6538660, essv5588386, essv5792270, essv6021667, essv6356789, essv5852743, essv6515237, essv6459751, essv5915842, essv6104235, essv6152654, essv5937020, essv6558513, essv5418869, essv5498710, essv5637868, essv6559521, essv5569943, essv6034625, essv6222301, essv5795526, essv5482649, essv6471391, essv5546191, essv6257725, essv5870109, essv5860556, essv6283367, essv6006325, essv6469296, essv5744635, essv5718658, essv5779473, essv5621721, essv5983112, essv6403608, essv6359613, essv6170053, essv6187648, essv5814809, essv5563792, essv5830093, essv5903349, essv5845655, essv6486924, essv5738784, essv6136143, essv5984397, essv5943890, essv5674100, essv5457177, essv5811182, essv6127628, essv6519250, essv5644064, essv5958816, essv5929876, essv5618681, essv5434519, essv6358060, essv6037865, essv6041010, essv6294870, essv6258694, essv6217776, essv5484760, essv6391294, essv6305764, essv6106827, essv6575216, essv6253683, essv5736725, essv6057719, essv5574095, essv5620479, essv5501251, essv5467052, essv5905119, essv5683380, essv6290616, essv6098017, essv5858512, essv5683075, essv6251856, essv5898757, essv5562081, essv5781787, essv5511679, essv6009642, essv6554500, essv6199228, essv6532869, essv5992828, essv5646271, essv6160333, essv5640823, essv5625049, essv5617908, essv6324502, essv5888453, essv5422792, essv6435336, essv6517424, essv5815646, essv6056700, essv6122199, essv6055326, essv5607671, essv6143342, essv5921288, essv5772121, essv6374134, essv5561622, essv6510628, essv5923868, essv5593686, essv5789784, essv5466477, essv6389980, essv6522092, essv6571661, essv5885852, essv6545966, essv6180667, essv5602342, essv5414169, essv5719669, essv5558448, essv5530885, essv6159934, essv5640350, essv5946034, essv5742501, essv5670405, essv6526301, essv5654360, essv6254650, essv6093516, essv6007149, essv6018236, essv5694374, essv5483747, essv6505264, essv5780952, essv6586810, essv6296279, essv5952311, essv5899765, essv6531694, essv5457699, essv6508941, essv5867155, essv5717510, essv6112308, essv6067373, essv6295497, essv6187698, essv6540912, essv5616483, essv5499360, essv5752680, essv5782613, essv5688205, essv5674277, essv6188310, essv6578436, essv6461486, essv5599508, essv6421890, essv5881883, essv5403579, essv6402113, essv5755694, essv6213405, essv6405759, essv6479177, essv6520458, essv6281812, essv6037449, essv6144179, essv5679793, essv5730380, essv5477962, essv6117782, essv6393797, essv5758894, essv5671745, essv6421165, essv5795370, essv5430152, essv6180244, essv5945256, essv6574036, essv5948389, essv5723471, essv5669515, essv5659294, essv5862551, essv5700777, essv5411137, essv5862534, essv5855538, essv5635859, essv6367444, essv6269268, essv6168107, essv5703505, essv6386511, essv6043396, essv5770965, essv5741459, essv5892927, essv5608545, essv5436218, essv5462016, essv5526052, essv5944891, essv5492275, essv6211720, essv5888599, essv5830041, essv5720002, essv5804666, essv5520105, essv5902689, essv5636408, essv5530119, essv6224917, essv5823234

Samples

HG00189, HG01173, HG00143, NA19703, HG01462, NA19664, HG00257, HG00315, HG00233, HG00181, NA18530, HG00737, HG00115, HG00449, HG01461, HG00693, HG00337, NA20814, HG01350, HG00272, HG01351, HG01083, HG00334, HG00185, HG00537, HG00311, HG00243, NA19079, HG00158, HG00139, HG01069, NA19720, HG00335, HG00148, NA18868, NA19235, HG00705, NA19722, HG00160, HG01198, HG01048, HG00323, HG00253, NA19789, NA20753, HG01124, HG00137, HG00443, HG00268, HG00266, HG00282, NA19070, HG00732, HG01095, HG00368, HG00556, HG00583, HG00275, HG01149, HG00740, NA19654, HG01102, HG00324, HG00284, HG00250, HG00479, NA20581, HG01101, HG00140, HG01334, NA19761, HG00152, HG00126, NA19625, HG01107, HG01148, NA19375, NA19003, HG00258, NA19729, HG00611, NA19652, HG00254, HG00336, NA18628, NA12272, HG01357, HG01174, HG01375, NA19679, HG01137, HG00116, NA19783, HG00662, HG00418, NA18615, HG01489, HG00620, HG00339, HG00513, NA19785, NA18631, HG00259, HG00267, HG00310, HG00280, HG00274, HG00595, HG01125, HG00628, HG00171, NA19463, NA19065, HG01437, HG00581, NA19676, HG00626, HG01060, HG01441, NA19648, HG01356, NA19397, HG00361, HG00187, HG00100, NA19704, HG01389, HG01374, HG00306, NA18603, HG01465, HG00699, HG01456, HG00566, NA18606, HG00177, HG00150, NA19746, NA19396, NA19660, HG01366, HG00251, NA19762, HG00702, HG00448, HG00173, NA19723, HG00330, HG00634, HG00736, HG00610, HG01354, HG00247, NA19054, NA19681, HG01455, NA19651, HG00120, HG00236, HG01072, NA19371, NA19731, HG01176, HG00182, NA19445, HG00530, HG00464, NA20818, NA19007, HG01353, HG00543, HG00313, HG01183, HG01136, HG00188, HG00149, HG00629, NA19657, HG01360, HG00176, NA19082, HG01187, NA19707, HG00596, HG01384, HG00328, HG00653, NA19391, HG00436, HG00533, NA18637, NA19788, HG00619, NA19776, HG00708, HG00635, NA19000, HG00373, HG01383, HG00117, HG00321, HG00276, NA19756, NA19675, NA18546, NA19685, HG00476, HG00124, HG00119, NA18559, NA19749, HG00375, HG01253, HG00136, HG00278, NA19773, HG01494, HG00256, NA19759, HG00111, HG00578, HG01491, HG00329, HG00656, HG01254, HG00186, HG00343, HG01251, NA19661, HG01378, NA19755, HG01082, NA19758, HG01112, HG01061, HG00437, NA20509

Known Genes

PRKG1

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2659556

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	237
Observed Complex	0
Frequency	n/a