A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2659439



Internal ID9925545
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:76940843..76943185hg38UCSC Ensembl
chr9:79555759..79558101hg19UCSC Ensembl
Cytoband9q21.2
Allele length
AssemblyAllele length
hg382343
hg192343
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1353e199
Supporting Variantsessv6117457, essv5904504, essv5548030, essv5814805, essv6586316, essv5860031, essv6166849, essv6346320, essv5757723, essv5433449, essv6170113, essv5531499, essv5595562, essv5448129, essv5797546, essv5493447, essv6188679, essv5802819, essv6166070, essv5422700, essv5688665, essv6293021, essv5638856, essv5980486, essv6400441, essv5938933, essv6519131, essv5807535, essv5739445, essv6308844, essv6171943, essv5508990, essv6418546, essv5680574, essv6312924, essv5981251, essv6340126, essv5964533, essv5782938, essv6429455, essv5804976, essv6058640, essv5715116, essv6495215, essv6506839, essv6400319, essv5438527, essv5696351, essv5418322, essv6563579, essv5455968, essv5840222, essv6187796, essv5745347, essv5591249, essv6015995, essv6286612, essv6558637, essv5581238, essv5418860, essv6476276, essv6031418, essv5712924, essv6096068, essv6450902, essv5748048, essv6527326, essv5978299, essv5714084, essv6152197, essv5639313, essv6555225, essv5734865, essv5774394, essv6344507, essv5411127, essv5705491, essv5407243, essv6538249, essv5946718, essv5558583, essv6057513, essv5751287, essv5914847, essv5402010, essv5753970, essv5540427, essv6031437, essv5875148, essv5551711, essv5726973, essv5590532, essv5802455, essv5779881, essv5687608, essv5710331, essv6493901, essv5511989, essv5622874, essv6386286, essv6384925, essv5497971, essv5919772, essv6342512, essv5797671, essv5494906, essv5947403, essv5665161, essv6587156, essv5561712, essv6545926, essv6224387, essv6109666, essv6106082, essv6079362, essv6342379, essv6337645, essv5897983, essv5952530, essv6414914, essv5551985, essv5416346, essv5971528, essv5817479, essv6581581, essv6491092, essv5415989, essv5954996, essv6227120, essv5463831, essv6495492, essv6235558, essv5964754, essv5409320, essv5664117, essv6176475, essv6463148, essv5969212, essv6501455, essv5833462, essv6534086, essv5571938, essv6260599, essv5953516, essv5437777, essv5492554, essv5624259, essv6269286, essv6008022, essv5435837, essv6378818, essv5860698, essv5770737, essv6446995, essv5758012, essv5580680, essv5493547, essv5886408, essv5815184, essv5921346, essv5797931, essv5736396, essv6302554, essv5591932, essv5675508, essv5639553, essv6125021, essv5799836, essv6503241, essv5468192, essv5956108, essv6200994, essv6028263, essv5729519, essv5833213, essv6393810, essv6196719, essv6067059, essv6384558, essv6118532, essv6273485, essv5640628, essv6395598, essv5596897, essv5514447, essv6125426, essv6379864, essv6283925, essv6565022, essv6485033, essv6090757, essv6568454, essv6003978, essv5658207, essv6228019, essv6154160, essv5702246, essv5807861, essv5457557, essv5837555, essv5909761, essv5932359, essv6121178, essv5883569, essv5791242, essv6230775, essv5918641, essv6265991, essv5985784, essv6181290, essv5931050, essv5889584, essv6488319, essv5889168, essv6014980, essv5738712, essv6032302, essv5983843, essv6565760, essv5694045, essv6079940, essv6349782, essv5419567, essv6112733, essv6263509, essv6526125, essv5606287, essv6063207, essv5484981, essv6073480, essv6147978, essv6278083, essv6139235, essv6007574, essv5716520, essv5531766, essv6414506, essv6182902, essv5493417, essv6307516, essv6526761, essv5704816, essv6139024, essv5742731, essv5416724, essv5719324, essv6497531, essv5972705, essv6122760, essv5823764, essv6460513, essv5945266, essv6097823, essv6429315, essv5640132, essv5908092, essv5700289, essv5700639, essv5645511, essv6252216
SamplesNA20588, NA19394, NA12383, NA19701, NA20761, NA20529, NA19664, HG00242, NA11920, HG00315, NA20512, NA19350, HG00153, NA19355, NA18504, NA20332, NA19377, NA20517, HG01461, NA19443, HG01051, NA19920, HG00261, NA20806, HG01522, HG00337, HG00271, NA07346, HG00641, HG00138, HG01350, HG00272, HG01177, NA19678, HG01492, NA07347, HG01083, HG00334, HG00311, HG00243, HG00158, NA11930, HG00281, NA19720, NA20518, HG00335, HG00148, NA20775, HG01519, NA18868, HG00232, NA12044, NA19722, HG00118, HG01198, NA20342, HG00323, HG01550, NA19789, HG01124, HG00137, NA19908, HG00266, HG01171, HG00282, NA19455, NA19663, HG00263, HG00275, HG00740, HG01047, HG00324, NA11919, HG00250, NA20581, NA19750, NA06989, HG00140, HG01334, NA19761, NA19682, NA12144, HG00246, NA12546, HG00258, NA19440, HG00254, NA18517, NA20276, NA19712, NA19747, HG01375, NA19835, HG00237, NA19470, NA19324, NA19311, HG00116, NA19783, NA12763, HG01342, NA19785, HG00342, NA19716, NA19468, HG00267, NA19093, NA20510, NA20786, HG00280, NA20826, NA19430, HG01125, HG00171, NA12154, NA18487, HG01437, HG00553, NA19676, HG01516, HG01441, HG01098, HG00249, NA11995, HG01359, HG01188, NA11933, HG01389, HG01374, NA20813, NA12045, HG00367, HG00318, HG01465, HG00103, NA12004, NA20805, NA19777, NA20808, HG00177, HG00150, NA20507, NA18870, NA12400, NA12413, NA12341, HG00327, NA20537, HG01250, NA19660, NA19201, NA19448, HG01488, HG00173, NA19723, NA19119, NA19916, HG00330, HG00736, NA19649, NA12283, HG01354, NA19771, NA19313, HG00247, HG00270, NA20513, NA19782, NA19681, NA12761, HG01134, HG01455, NA19651, NA06984, HG01170, HG00236, HG01495, NA20340, NA19731, HG01176, NA20811, NA19901, NA19725, NA18520, HG00637, NA19209, HG00178, NA18908, HG00264, NA11993, HG00108, NA20818, HG01183, HG00149, NA19247, NA19657, HG00328, NA12342, NA19347, HG00190, NA20809, HG01515, NA19236, HG00320, HG00533, NA20770, NA20344, NA19776, HG01390, HG01073, HG00273, NA19114, NA19655, HG00373, HG01197, NA18499, NA11894, NA12249, HG01383, HG01182, HG00117, NA12827, HG00276, NA19160, NA20542, NA19675, HG01204, NA19436, NA20773, NA20801, HG00119, HG00285, NA19834, HG00375, HG00357, HG00278, HG01494, NA20504, NA19786, HG00319, NA07037, HG00256, NA20582, NA19713, HG01254, HG01055, HG00174, NA19726, HG00343, NA20528, HG00252, NA07056, HG01378, NA20322, NA07000, HG01112, HG00554, HG01191, HG01061, NA19153
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2659439
Frequency
Sample Size1151
Observed Gain0
Observed Loss260
Observed Complex0
Frequencyn/a


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