A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2659336



Internal ID9925441
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32659239..32667645hg38UCSC Ensembl
Outerchr6:32658868..32668015hg38UCSC Ensembl
Innerchr6:32627016..32635422hg19UCSC Ensembl
Outerchr6:32626645..32635792hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg389148
hg199148
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1111e199
Supporting Variantsessv6379662, essv5624353, essv6151234, essv5733503, essv6486953, essv5859599, essv5481311, essv5418927, essv6525734, essv6593018, essv6149875, essv6334978, essv5802755, essv5423187, essv5587594, essv6326000, essv5448727, essv5748386, essv6246021, essv5830236, essv6150380, essv5849552, essv6457618, essv6279478, essv5981269, essv6441555, essv5472390, essv6443189, essv5530783, essv5733065, essv5928150, essv6131900, essv5436532, essv5605033, essv5456796, essv6426324, essv6211675, essv6527457, essv6311662, essv5675634, essv5629917, essv5865108, essv5674656, essv6466237, essv6282093
SamplesHG00096, HG00143, HG00142, HG00242, HG00100, HG00151, HG00233, HG00244, HG00115, HG00150, HG00261, HG00127, HG00251, HG00122, HG00247, HG00243, HG00158, HG00139, HG00106, HG00156, HG00262, HG00160, HG00264, HG00108, HG00260, HG00245, HG00239, HG00250, HG00117, HG00157, HG00152, HG00146, HG00141, HG00126, HG00258, HG00155, HG00265, HG00136, HG00125, HG00111, HG00259, HG00123, HG00112, HG00131, HG00252
Known GenesHLA-DQB1
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2659336
Frequency
Sample Size1151
Observed Gain0
Observed Loss45
Observed Complex0
Frequencyn/a


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