A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2659273



Internal ID9578692
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:178921361..178926196hg38UCSC Ensembl
chr5:178348362..178353197hg19UCSC Ensembl
Cytoband5q35.3
Allele length
AssemblyAllele length
hg384836
hg194836
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6239438, essv6266727, essv6242860, essv5858101, essv6069047, essv5759070, essv5831203, essv6175863, essv5908780, essv6216962, essv5612513, essv6242709, essv5706160, essv5425351, essv6028223, essv6282874, essv5959013, essv5526808, essv6486031, essv5652373, essv5913488, essv5739620, essv6096495, essv5527959, essv6328704, essv6465691, essv6177054, essv6299823, essv5620347, essv6080385, essv6283842, essv6177455, essv6078005, essv5646185, essv6513893, essv5638264, essv6202016, essv6063493, essv5522421, essv5980798, essv5762480, essv6247738, essv6471021, essv6260207, essv5966238, essv5730470, essv5607378, essv5494556, essv6267048, essv6580623, essv6393577, essv6325078, essv6460940, essv5669204, essv6518084, essv6484596, essv5660093, essv5707660, essv6478296, essv6396908, essv6352465, essv5407089, essv5742718, essv5534258, essv5673538, essv6546898, essv6584729, essv5928661, essv5721244, essv5536030, essv5399304, essv5675151, essv6302540, essv6474040, essv6298133, essv5894801, essv5819409, essv6372638, essv5921880, essv5926411, essv5710773, essv5435052, essv5738898, essv5663053, essv6378619, essv5898582, essv6440627, essv5917106, essv6410907, essv6527094, essv5500402, essv6585973, essv5424464, essv6449520, essv5577207, essv5575087, essv5561976, essv6507009, essv6390654, essv5717759, essv6171054, essv6569743, essv6103791, essv6347990, essv5579456, essv5475662, essv6358705, essv6067919, essv6004661, essv5849983, essv5676764, essv5761067, essv6567378
SamplesHG00189, NA12717, HG01521, NA18508, NA10851, HG00187, NA12843, NA11931, HG01066, HG00306, NA20512, NA12045, HG00367, HG00318, HG00244, NA19350, NA20805, NA20808, NA07357, HG01140, NA20814, NA07346, HG01366, NA20798, NA20756, NA20795, HG01492, HG00736, NA07048, NA11918, HG01083, HG00247, HG00369, HG00185, HG00311, HG00243, HG01110, NA11930, HG00277, HG00148, HG01170, NA20812, HG00325, HG01176, HG00637, HG00338, HG00159, NA20342, NA20127, HG00253, NA20753, NA12748, HG01124, HG00137, HG00149, HG00266, HG00176, NA19670, NA19347, HG01095, NA20536, NA19788, HG00275, NA20519, HG00551, NA12234, HG01390, HG01094, HG01073, HG00273, HG00373, NA11893, HG00331, NA20538, NA18912, NA06989, NA20282, HG00146, NA12144, HG00246, HG01107, HG01075, HG01148, NA20799, HG00336, HG00734, NA20520, NA07051, NA20790, HG01375, HG00308, HG01494, NA20504, HG00116, NA19360, HG00256, HG01342, HG00339, HG00111, HG00312, NA12830, HG00186, NA20786, NA20807, HG00147, NA19129, NA19758, HG01112, HG01097, HG00554, HG01191, NA20772, NA19676
Known GenesZFP2
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2659273
Frequency
Sample Size1151
Observed Gain0
Observed Loss113
Observed Complex0
Frequencyn/a


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