A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2659149



Internal ID9925254
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:59590946..59591284hg38UCSC Ensembl
chr18:57258178..57258516hg19UCSC Ensembl
Cytoband18q21.32
Allele length
AssemblyAllele length
hg38339
hg19339
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6250325, essv5746433, essv5660958, essv5544626, essv5673346, essv5865270, essv6542949, essv6086436, essv6510296, essv5778703, essv6479677, essv5681273, essv5673342, essv6378466, essv6416766, essv6058835, essv5423289, essv6369038, essv6341797, essv6114490, essv6085131, essv5928063, essv5804304, essv6529113, essv6233278, essv6022930, essv5993552, essv6223218, essv5651168, essv5678253, essv5920576, essv5919640, essv5786944, essv6172642, essv5991451, essv6082790, essv5566106, essv6528891, essv6483463, essv6040445, essv5786814, essv5708860, essv6115147, essv6010284, essv6005640, essv5669288, essv5635789, essv5601169, essv6224038, essv5542966, essv5491351, essv6281667, essv5894974, essv5697214, essv5963358, essv6089957, essv5550860, essv6092570, essv6015766, essv6131341, essv6295449, essv6251035, essv6490102, essv6144613, essv6481070, essv5950865, essv5718362, essv5750380, essv5434300, essv6478614, essv5428296, essv6180841, essv6137633, essv6091067, essv5903014, essv6487212, essv6320638, essv6029854, essv6573267, essv6493909, essv6332255, essv6281740, essv5570868, essv6529421, essv5992117, essv5439312, essv6150771, essv6323552, essv6313234, essv6503539, essv6519321, essv6350730, essv5791828, essv5530878, essv5621551, essv6120657, essv5636251, essv5582554, essv6229678, essv5749497, essv5623153, essv6282171, essv5715791, essv5711728, essv6208924, essv5664014, essv5500161, essv6457316, essv6246380, essv6592731, essv6273729, essv6137133, essv6060184, essv5882174, essv5992234, essv6003098, essv5846412, essv6441343, essv5739196, essv6597858, essv5586388, essv5739815, essv5714404, essv5518117, essv6040609, essv5568328, essv6038119, essv6390214, essv6045120, essv5913219, essv5769875, essv5585245, essv6232353, essv5468476, essv5700275, essv6552090, essv6510513, essv5644120, essv6557538, essv5499242, essv6197098, essv6228920, essv6577954, essv5650427, essv6585380, essv6371721, essv5707612, essv6196179, essv5914222, essv5398350, essv5977012, essv5571974, essv6235119, essv5429499, essv5670040, essv5779738, essv6409572, essv5612718, essv5869534, essv5527225, essv5541326, essv5849287, essv6566750, essv5860104, essv6194711, essv6153244, essv5492161, essv6211750, essv5643712, essv6356283, essv5942160, essv5787291, essv5644773, essv6042157, essv5790630, essv5781392, essv6169230, essv5751724, essv6591609, essv5916488, essv5504590, essv5952703, essv5702869, essv6588082, essv6369675, essv5571133, essv5773862, essv6177016, essv6565298, essv6020222, essv6572648, essv6304471, essv5436967, essv6491849, essv6330501, essv5881346, essv5609722, essv6086765, essv5689070, essv6273570, essv6108070, essv5822275, essv5559233, essv6407297, essv6274273, essv5451425, essv5552950, essv6499329, essv5943199, essv5710310, essv5425062, essv5435828, essv5513763, essv6021803, essv5540197, essv6410665, essv6357678, essv5967792, essv5635222, essv6303248, essv6193519, essv6214688, essv6522084, essv6214892, essv5650111, essv6554858, essv6295145, essv5812198, essv6576971, essv5974439, essv5644241, essv5399887, essv5824173, essv5473873, essv5753152, essv5498231, essv6574903, essv5753790, essv6570424, essv6542961, essv6410648, essv6362685, essv6115525, essv5466933, essv6127624, essv5885295, essv5645480, essv5961930, essv5487293, essv6057623, essv5772317, essv6529667, essv5672372, essv6463103, essv5936966, essv5446122, essv6398776, essv5944838, essv5806297, essv5538075, essv5627043, essv5563544, essv6375229, essv6178577, essv6023201, essv5919081, essv5746754, essv5833818, essv6544222, essv6212233, essv6016598, essv5400481, essv6401585, essv5975092, essv6480773, essv5984101, essv5945197, essv6490239, essv6542883, essv6097854, essv5835647, essv6548884, essv6460711, essv5750789, essv5413568, essv6331211, essv5796675, essv6269853, essv6092023, essv5425255, essv5510633, essv5835998, essv6551365, essv6377860, essv6039545, essv5748868, essv5887869, essv6147951, essv5719350, essv5743783, essv6131343, essv5970149, essv5713132, essv5594208, essv5953448, essv5583724, essv6194043, essv5915047, essv6106564, essv6224968, essv5877007, essv6291959, essv6279325, essv6165774, essv6063785, essv5905262, essv6022090, essv5492786, essv5476261, essv6505979, essv5681070, essv6293241, essv6352935, essv5861130, essv6328883, essv6017868, essv5582686, essv5582740, essv6249614, essv5526699, essv5964729, essv6429907, essv5734776, essv6595679, essv6194411, essv5940557, essv5581516, essv5654971, essv6463709, essv5676802, essv6292371, essv5935663, essv5893479, essv6045203, essv6251440, essv5589161, essv6355160, essv5837503, essv6036042, essv5873776, essv5591460, essv6484027, essv5984074, essv5551177, essv6427571, essv6301055, essv6210029, essv5804268, essv5564728, essv5984812, essv5689592, essv5663269, essv5456660, essv6345019, essv6089418, essv5839623, essv6216191, essv5618571, essv5573524, essv5467850, essv6487458, essv5795916, essv5994182, essv6446945, essv6363052, essv5472925, essv5443471, essv6404502, essv6100071, essv5831362, essv6479330, essv5934247, essv5809887, essv5495205, essv5795910, essv5600623, essv5904332, essv5783775, essv6437251, essv6527740, essv6303995, essv6048374, essv5955705, essv6268002, essv6597894, essv5760878, essv6238781, essv5499497, essv6282982, essv5433057, essv5418452, essv6531826, essv5579876, essv6530891, essv5972054, essv5596335, essv5779871, essv6167522, essv6551913, essv5432463, essv5925332, essv5400238, essv5554558, essv6553266, essv5399242, essv6114987, essv5714467, essv6489412, essv5402559, essv6593577, essv5662235, essv6475899, essv6399586, essv5926657, essv5528262, essv6103693, essv5870066, essv5890264, essv5555591, essv6590602, essv6111142, essv5819721, essv6413466, essv6377264, essv6027165, essv6176603, essv5825949, essv6321862, essv6035855, essv6057369, essv5695650, essv5684180, essv6347448, essv6124460, essv6371117, essv5972798, essv5577337, essv5723929, essv5973667, essv5858315, essv5989624, essv5867957, essv5414642, essv5509072, essv6551429, essv6288617, essv6005804, essv5546618, essv6317876, essv6591119, essv6316196, essv5948508, essv5979829, essv5782759, essv5652908, essv5719265, essv6403170, essv6029001, essv5536065, essv6236189, essv6210285, essv6573143, essv6206546, essv6277768, essv5619539, essv6181197, essv6073195, essv5895934, essv6007498, essv6590493, essv6030810, essv5926753, essv5450165, essv6357571, essv6420727, essv5958281, essv5548211, essv5864371, essv6530265, essv6454904, essv6050372, essv5834099, essv6532976, essv6288056, essv6155684, essv5748524, essv5933973, essv6050979, essv6272520, essv6075542, essv6372253, essv6251337, essv5960078, essv5855248, essv5645219, essv5790731, essv6466908, essv6294589, essv6286166, essv5437914, essv6536084, essv5895579, essv5715231, essv5441358, essv5751544, essv5415372, essv5896103, essv6391490, essv6216872, essv6311709, essv5846008, essv6190580, essv6524293, essv5977221, essv5570397, essv6459610, essv5492681, essv6319092, essv6085411, essv5692024, essv6414054, essv5502198, essv6490759, essv6499742, essv6380637, essv5820242, essv5443943, essv5696067, essv6573736, essv5523512, essv6052324, essv6505683, essv5407416, essv6163238, essv6191515, essv6145840, essv6463641, essv5612804, essv5523139, essv5714250, essv5440461, essv6529606, essv6372793, essv6155558, essv6192849, essv5583380, essv5552437, essv5483440, essv5534064, essv6416977, essv5844623, essv6283083, essv5515827, essv6181347, essv6127054, essv5508063, essv6580244, essv6260884, essv6087073, essv6393956, essv5901690, essv6459100, essv5535149, essv6571169, essv6318286, essv6205732, essv6409014, essv5996853, essv5457659, essv6269367, essv5813090, essv5679425, essv5657574, essv6540731, essv6238671, essv6299517, essv6090439, essv6310619, essv6293517, essv5581507, essv6393165, essv6076999, essv5621658, essv5425509, essv5626331, essv6139790, essv5848552, essv6318305, essv5808313, essv6493331, essv5835473, essv6479329, essv6040449, essv5659532, essv5426791, essv5733833, essv5765642, essv6561090, essv6107675, essv5863007, essv6474981, essv6175776, essv6516331, essv5919489, essv5504944, essv5881631, essv6113389, essv6326812, essv5784953, essv5464815, essv5722154, essv5983066, essv5612331, essv6023630, essv5767967, essv6064644, essv5885166, essv6385480, essv5884092, essv5477959, essv5456159, essv5403129, essv5409711, essv6215716, essv6087496, essv5602778, essv6006548, essv5753967, essv6588684, essv6368215, essv6408617, essv5747595, essv5571216, essv5498611, essv6591711, essv6593932, essv6017694, essv5749707, essv6377561, essv6397202, essv5789223, essv5885685, essv5621532, essv5903133, essv6115402, essv6281083, essv6253951, essv5811570, essv5632441, essv5525044, essv5992424, essv6526124, essv6066066, essv5936903, essv6460653, essv5444741, essv5465415, essv5650898, essv6369672, essv6160753, essv6537133
SamplesNA20588, NA18502, HG00189, HG00650, HG00442, HG00608, NA18621, HG00142, NA19664, NA19399, NA11920, HG00151, NA18999, NA12751, NA18504, NA19377, NA18530, HG01461, NA19920, NA18633, NA19067, HG00337, NA19446, HG00138, NA19379, HG00589, NA19315, NA20798, NA20589, HG01177, NA19678, NA20756, NA18558, NA18960, NA18618, NA18916, NA18574, NA11918, NA18582, NA20768, HG01083, HG01365, NA19384, HG00311, HG00243, NA20291, NA19079, NA18949, HG00158, HG00512, HG00281, HG00139, NA19720, NA18868, NA19238, NA19172, NA19239, NA18985, HG00326, NA19985, NA19789, NA19921, HG00137, NA12777, NA18951, NA18605, NA20535, HG00731, NA20800, NA18538, NA19056, HG01095, HG00657, NA19717, HG00344, NA12718, NA18572, NA18948, HG00692, NA19064, NA18548, NA18907, NA18537, HG01047, HG01102, NA19084, HG00404, HG00331, NA18532, NA19059, NA19009, NA19682, NA18523, HG00463, NA12778, NA18593, HG01107, HG00611, NA19652, NA19440, NA18533, HG00336, NA19256, NA18517, NA19712, NA19434, NA18564, NA18628, HG00580, NA19444, NA19331, NA20520, NA19010, HG01174, NA19428, HG00116, NA19083, NA20281, NA19360, HG00662, HG01342, NA12347, NA19328, HG00614, HG00513, HG00478, NA19785, NA19223, NA19779, HG00267, NA18609, NA19102, NA18873, NA19770, NA20826, HG00274, NA20503, HG00595, NA18989, NA19129, HG00628, NA18624, NA19065, NA18612, NA19074, HG01437, HG00581, NA19431, NA18577, HG00593, HG00626, HG01060, HG00114, HG01441, NA19700, HG00592, NA19055, NA19397, NA18924, NA19466, NA11995, NA18592, HG01359, HG01052, NA18980, HG01079, HG00100, NA18561, NA19704, NA18507, HG01188, NA11933, NA18599, HG01374, HG00306, NA20813, NA18603, NA12045, NA19092, HG00699, NA19819, NA12058, NA20808, NA20346, HG00150, NA20507, NA19190, NA18526, NA12341, NA20537, NA19068, HG01250, NA19746, NA19660, NA19076, NA18550, HG00251, NA18489, NA18595, HG00702, HG00689, NA18635, NA19916, HG00634, NA18942, HG00610, NA19197, HG01354, NA19313, HG00247, NA19054, NA18498, NA20513, NA19681, NA20336, HG01110, HG00590, NA12761, HG01134, NA12282, HG00277, NA12005, NA19651, HG00120, HG00683, HG00106, NA19719, NA19371, NA18560, NA19075, NA18617, NA19471, NA19087, NA12889, NA19002, NA19725, NA19189, NA18520, HG00637, HG00338, NA12828, HG00178, NA18973, HG00530, HG00419, NA19451, NA18638, NA12748, HG00464, HG00108, NA20818, NA19007, HG00543, HG01136, HG00149, HG00560, NA19247, NA19657, HG00183, NA19082, NA19707, NA20787, HG01384, NA19077, HG00428, NA19462, NA19347, NA20536, NA19391, HG00475, HG00584, HG00500, NA19788, NA18910, NA20344, NA19776, NA19000, NA19655, HG00373, HG01197, NA18499, HG01383, NA18853, NA19225, NA20828, NA19756, HG00141, NA18536, NA20542, NA18576, NA19685, NA19401, HG00476, NA18535, NA19834, NA19108, NA18952, NA18543, NA18559, NA19749, HG00565, NA18950, HG00375, NA19732, HG01253, HG00136, HG00638, NA07051, HG00607, NA20504, NA19786, HG00319, HG01108, NA19818, NA19759, NA19376, HG00707, HG00672, HG00578, HG00312, NA19438, HG00329, NA18987, NA12830, NA20807, NA19726, NA18552, HG00252, NA18984, HG00472, NA18505, HG00345, HG01097, NA18549, HG00437, NA20761, HG00542, NA12717, NA12842, NA19703, NA12286, NA20508, HG00671, NA19066, NA18861, NA18508, NA10851, HG00559, NA12273, NA18565, HG00315, NA20802, HG00244, NA19350, HG00181, NA19359, NA19355, NA20332, NA18959, HG00737, NA18616, HG00449, NA20517, HG00654, NA20356, NA12399, NA18602, HG01522, HG00693, NA18627, NA19107, HG00663, HG00641, NA18940, NA18519, HG00272, NA18597, HG01351, HG01168, NA18567, NA19457, NA18571, HG00334, NA20287, NA19904, NA11930, NA12275, HG01069, HG01080, NA20518, HG00148, HG00232, NA19372, NA12044, NA11994, HG00534, NA19235, HG00705, HG00160, HG00118, NA18990, HG01198, HG01048, HG01133, NA20342, NA20127, HG00253, NA18539, HG01124, HG00154, NA19908, NA18747, HG00443, HG01171, HG00282, NA19670, NA19403, HG00557, NA18933, HG00732, HG00368, HG00556, HG00583, HG00263, NA18579, NA18871, HG01149, NA18534, HG00239, HG00740, NA20525, NA19654, HG00324, NA18573, NA19461, NA11919, HG00651, HG00250, NA18626, HG00531, HG00479, HG00684, NA18912, HG01101, HG00140, NA18553, NA19099, NA19761, NA18555, HG00152, HG00704, NA19469, HG00246, NA18858, NA12546, NA18541, HG01075, NA19012, NA18953, HG01148, NA19375, NA19003, HG00258, HG00254, NA19390, HG00265, NA19147, HG00625, NA19747, NA19072, HG01551, HG00734, HG01357, NA20790, HG01375, NA19835, HG00473, NA20778, HG00237, NA19679, NA19324, NA19311, HG01113, HG01137, NA19783, HG00620, NA18501, HG00342, NA19716, NA19093, NA20510, NA18636, HG00310, NA20786, HG00280, NA11843, NA19116, NA19080, NA19780, NA19900, NA18983, NA20502, NA19430, HG01111, HG01125, HG00171, NA12890, NA12006, NA19463, NA18623, NA19063, NA19346, HG00553, NA19676, NA18620, HG00403, HG01098, HG01356, HG00536, HG00249, NA11829, HG00524, HG00187, NA19332, NA20531, HG00640, HG00318, NA18486, HG01465, NA18545, NA19393, NA19777, NA19057, NA18596, HG01456, NA18606, HG00179, HG00177, NA18870, HG01140, HG00327, NA19374, NA19396, HG00127, NA18944, HG01070, HG00501, NA19382, NA19762, NA19448, HG01488, HG00448, NA18982, NA19198, NA12348, HG00346, NA12283, NA19771, NA19138, HG00369, NA19782, NA18964, NA18611, NA19404, HG01067, NA19383, NA18874, NA06984, NA18977, NA19917, NA19137, HG01072, NA19731, NA19385, HG00422, NA19317, HG01440, HG00427, NA19901, NA19456, NA19445, NA11993, NA18614, NA10847, HG01353, HG01183, NA18544, NA19210, NA19437, HG00596, NA20505, NA12003, HG00190, HG00653, NA18956, HG00701, NA19236, NA18516, HG00436, HG00320, HG00533, NA18637, NA20506, NA20126, HG00619, HG00708, HG00635, HG01390, NA18566, HG00273, NA19114, NA20299, NA19449, NA18856, HG00117, HG00613, HG00525, HG00321, NA12827, NA19257, HG00276, NA18634, NA20534, NA19675, NA18945, HG01204, NA19436, NA18546, NA18608, NA20773, NA18542, NA18909, HG01190, HG00285, NA18961, NA19435, NA18941, NA20804, HG00278, NA19380, NA20785, NA19334, NA19439, NA20516, NA07037, NA19085, NA06986, NA19398, NA20348, HG00421, HG00656, HG01254, HG00123, HG00698, HG00131, NA19213, NA20528, NA19661, HG01378, NA19755, NA18488, HG01082, NA19758, NA18511, NA18522, HG00180, NA18622, HG01061, NA18562, NA12776, NA18965
Known GenesCCBE1
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2659149
Frequency
Sample Size1151
Observed Gain0
Observed Loss671
Observed Complex0
Frequencyn/a


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