Variant Details

Variant: esv2657419

Internal ID

9576838

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr5:143238970..143240294	hg38	UCSC Ensembl
	chr5:142618535..142619859	hg19	UCSC Ensembl

Cytoband

5q31.3

Allele length

Assembly	Allele length
hg38	1325
hg19	1325

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv5765985, essv6272526, essv5722133, essv6087112, essv5594963, essv6185491, essv5707031, essv5986994, essv6318189, essv6150701, essv6096037, essv6029635, essv6134101, essv5498854, essv5449799, essv6297815, essv6427363, essv6483591, essv5913997, essv5487711, essv6551548, essv5759076, essv5561716, essv6410990, essv5677050, essv5625158, essv6279812, essv6185594, essv5404184, essv6449374, essv6418261, essv6375589, essv6313377, essv5615480, essv5908153, essv5517542, essv5695910, essv5827633, essv6138546, essv6350749, essv5476771, essv5638405, essv6436597, essv6464666, essv5428493, essv6476838, essv5934931, essv6586351, essv6374160, essv5472037, essv6570013, essv6270218, essv6179549, essv6463717, essv5730811, essv5548654, essv6372773, essv6055243, essv5594487, essv5889140, essv6322776, essv6371678, essv6151669, essv6246332, essv5928717, essv6250974, essv5578901, essv6169939, essv5697078, essv5939357, essv6145065, essv5796930, essv6411386, essv5613329, essv6359415, essv6282492, essv5414653, essv5417685, essv6543878, essv6505503, essv6503445, essv6377355, essv5439807, essv5474726, essv6418710, essv6145813, essv5742386, essv5953512, essv5516453, essv5748846, essv5997757, essv5501981, essv6533257, essv6080300, essv5834301, essv6300234, essv5811640, essv5864020, essv5486034, essv6043759, essv5853727, essv6287943, essv5808017, essv5596215, essv6285530, essv6052770, essv5791666, essv5681325, essv6092154, essv5502409, essv5812141, essv5399617, essv6134725, essv6570048, essv5781951, essv6549699, essv6338660, essv5776133, essv5489330, essv6474017

Samples

HG00189, NA12842, HG00143, HG00231, HG00142, HG00249, HG00361, HG00187, HG00100, HG00257, HG00315, HG00306, HG00151, NA20752, HG00367, HG00318, HG00244, HG00181, HG00150, HG00261, NA12341, HG00337, HG00327, HG00271, HG00138, HG00127, HG00122, HG00346, HG00247, HG00369, HG00270, HG00334, HG00243, HG00158, HG00281, HG00139, HG00277, HG00120, HG00335, HG00148, HG00236, HG00262, HG00232, HG00309, HG00182, HG00160, HG00118, HG00159, HG00326, HG00178, HG00323, HG00253, HG00260, HG00313, HG00137, HG00133, HG00188, HG00154, HG00149, HG00268, HG00183, HG00282, HG00328, HG00320, HG00344, HG00263, HG00275, NA20506, NA20519, HG00324, HG00284, HG00273, HG00373, HG00331, NA20538, NA06989, HG00117, HG00321, HG00157, HG00140, HG01334, HG00276, HG00146, HG00246, HG00126, HG00258, HG00155, HG00254, HG00119, HG00336, HG00285, HG00265, HG00366, HG00353, HG00375, HG00136, HG00278, HG00237, NA20504, HG00116, HG00256, HG00339, HG00269, HG00125, HG00111, HG00259, HG00329, HG00342, HG00174, HG00123, HG00186, HG00112, HG00280, NA19726, HG00343, NA19900, HG00372, HG00274, HG00252, HG00345

Known Genes

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2657419

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	120
Observed Complex	0
Frequency	n/a