Variant Details

Variant: esv2657377

Internal ID

9576796

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chrX:155641695..155958434	hg38	UCSC Ensembl
	chrX:154871356..155188099	hg19	UCSC Ensembl

Cytoband

Xq28

Allele length

Assembly	Allele length
hg38	316740
hg19	316744

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv5840267, essv5634048, essv6580591, essv5569119, essv6305178, essv6520391, essv6441442, essv6320466, essv6005209, essv5633303, essv5960787, essv5423138, essv5475271, essv5560618, essv6067001, essv6149606, essv5724818, essv5596033, essv5842982, essv6104534, essv5879491, essv5977204, essv5682450, essv5710392, essv5886120, essv5754049, essv5794313, essv5588425, essv5801538, essv5659911, essv6202690, essv6138993, essv6472693, essv6291377, essv5988864, essv5503110, essv6563936, essv6014717, essv6239949, essv5911937, essv6400711, essv6318558, essv6524115, essv5448811, essv5563603, essv6559693, essv5685636, essv6548106, essv6484138, essv5790160, essv6530904, essv5985147, essv5736514, essv6243870

Samples

HG00542, HG00442, HG00361, HG01389, HG01374, NA18596, NA18606, NA18616, HG01140, HG00138, NA19076, HG01350, HG00589, HG00251, NA18595, HG00689, HG00448, HG01365, HG01124, HG01353, HG01136, HG00154, NA18544, NA18613, NA19077, HG00190, HG00653, HG00436, NA18637, HG00500, HG00619, HG00692, NA18548, NA19461, HG00651, HG00613, HG00704, NA18536, HG00246, NA20534, NA18543, NA19072, HG00580, NA19835, HG00418, NA18610, NA19078, HG00478, HG00421, HG00656, NA18636, HG00280, HG01082, NA18549

Known Genes

SPRY3, VAMP7

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2657377

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	54
Observed Complex	0
Frequency	n/a