A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2653042



Internal ID8716600
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:5622402..5623123hg38UCSC Ensembl
Outerchr17:5525722..5526443hg19UCSC Ensembl
Outerchr17:5466446..5467167hg18UCSC Ensembl
Cytoband17p13.2
Allele length
AssemblyAllele length
hg38540
hg19540
hg18540
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5289841
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2653042
Frequency
Sample Size1
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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