A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2652257



Internal ID8715815
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:97039285..97040671hg38UCSC Ensembl
Outerchr12:97433063..97434449hg19UCSC Ensembl
Outerchr12:95957194..95958580hg18UCSC Ensembl
Cytoband12q23.1
Allele length
AssemblyAllele length
hg381387
hg191387
hg181387
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5195442
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2652257
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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