A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2645526



Internal ID8362400
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:17810033..17811527hg38UCSC Ensembl
Outerchr4:17811656..17813150hg19UCSC Ensembl
Outerchr4:17420754..17422248hg18UCSC Ensembl
Cytoband4p15.31
Allele length
AssemblyAllele length
hg381495
hg191495
hg181495
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5214305
SamplesNA18507
Known GenesDCAF16, NCAPG
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2645526
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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