A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2638055



Internal ID8701613
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:29640877..29648180hg38UCSC Ensembl
Outerchr13:30215014..30222317hg19UCSC Ensembl
Outerchr13:29113014..29120317hg18UCSC Ensembl
Cytoband13q12.3
Allele length
AssemblyAllele length
hg387304
hg197304
hg187304
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5183507
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2638055
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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