A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2618097



Internal ID8681655
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:43979814..43980506hg38UCSC Ensembl
Outerchr22:44375694..44376386hg19UCSC Ensembl
Outerchr22:42707027..42707719hg18UCSC Ensembl
Cytoband22q13.31
Allele length
AssemblyAllele length
hg38550
hg19550
hg18550
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5204646
SamplesNA18507
Known GenesSAMM50
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2618097
Frequency
Sample Size1
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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