A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2605106



Internal ID8668664
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:6368800..6376149hg38UCSC Ensembl
Outerchr10:6410762..6418111hg19UCSC Ensembl
Outerchr10:6450768..6458117hg18UCSC Ensembl
Cytoband10p15.1
Allele length
AssemblyAllele length
hg387350
hg197350
hg187350
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5324528
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2605106
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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