A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2580999



Internal ID8297871
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:37241453..37242327hg38UCSC Ensembl
Outerchr19:37732355..37733229hg19UCSC Ensembl
Outerchr19:42424195..42425069hg18UCSC Ensembl
Cytoband19q13.12
Allele length
AssemblyAllele length
hg38349
hg19349
hg18349
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5262761
SamplesNA18507
Known GenesZNF383
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2580999
Frequency
Sample Size1
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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