A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2571756



Internal ID8288628
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:35803021..35804549hg38UCSC Ensembl
Outerchr9:35803018..35804546hg19UCSC Ensembl
Outerchr9:35793018..35794546hg18UCSC Ensembl
Cytoband9p13.3
Allele length
AssemblyAllele length
hg381529
hg191529
hg181529
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5358942
SamplesNA18507
Known GenesNPR2
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2571756
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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