A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2569306



Internal ID8632864
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:96499011..96500540hg38UCSC Ensembl
Outerchr11:96232175..96233704hg19UCSC Ensembl
Outerchr11:95871823..95873352hg18UCSC Ensembl
Cytoband11q21
Allele length
AssemblyAllele length
hg381530
hg191530
hg181530
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5215962
SamplesNA18507
Known GenesJRKL-AS1
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2569306
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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