A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2559240



Internal ID8622799
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:165839600..165840362hg38UCSC Ensembl
Outerchr6:166253088..166253850hg19UCSC Ensembl
Outerchr6:166173078..166173840hg18UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg38515
hg19515
hg18515
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5307788
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2559240
Frequency
Sample Size1
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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