A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2545701



Internal ID8609259
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:83846442..83847859hg38UCSC Ensembl
Outerchr4:84767595..84769012hg19UCSC Ensembl
Outerchr4:84986619..84988036hg18UCSC Ensembl
Cytoband4q21.23
Allele length
AssemblyAllele length
hg381418
hg191418
hg181418
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5343758
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2545701
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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