A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2522999



Internal ID8586557
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:893414..895378hg38UCSC Ensembl
Outerchr17:796654..798618hg19UCSC Ensembl
Outerchr17:743404..745368hg18UCSC Ensembl
Cytoband17p13.3
Allele length
AssemblyAllele length
hg381965
hg191965
hg181965
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5204145
SamplesNA18507
Known GenesNXN
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2522999
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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