A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2513498



Internal ID8577056
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:20382084..20383007hg38UCSC Ensembl
Outerchr1:20708577..20709500hg19UCSC Ensembl
Outerchr1:20581164..20582087hg18UCSC Ensembl
Cytoband1p36.12
Allele length
AssemblyAllele length
hg38410
hg19410
hg18410
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5214092
SamplesNA18507
Known GenesLINC01141
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2513498
Frequency
Sample Size1
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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