A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2513167



Internal ID8576725
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:113876387..113877893hg38UCSC Ensembl
Outerchr4:114797543..114799049hg19UCSC Ensembl
Outerchr4:115016992..115018498hg18UCSC Ensembl
Cytoband4q26
Allele length
AssemblyAllele length
hg381507
hg191507
hg181507
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5382191
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2513167
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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