A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2506890



Internal ID8223762
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:8028711..8030190hg38UCSC Ensembl
Outerchr11:8050258..8051737hg19UCSC Ensembl
Outerchr11:8006834..8008313hg18UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg381480
hg191480
hg181480
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5236741
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2506890
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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