A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2497060



Internal ID8560618
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:210465264..210466678hg38UCSC Ensembl
Outerchr1:210638608..210640022hg19UCSC Ensembl
Outerchr1:208705231..208706645hg18UCSC Ensembl
Cytoband1q32.2
Allele length
AssemblyAllele length
hg381415
hg191415
hg181415
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5390708
SamplesNA18507
Known GenesHHAT
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2497060
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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