A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2448178



Internal ID8511736
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:7406959..7408582hg38UCSC Ensembl
Outerchr11:7428190..7429813hg19UCSC Ensembl
Outerchr11:7384766..7386389hg18UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg381624
hg191624
hg181624
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5337681
SamplesNA18507
Known GenesSYT9
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2448178
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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