A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2437036



Internal ID8153908
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:76494564..76501447hg38UCSC Ensembl
Outerchr10:78254322..78261205hg19UCSC Ensembl
Outerchr10:77924328..77931211hg18UCSC Ensembl
Cytoband10q22.3
Allele length
AssemblyAllele length
hg386884
hg196884
hg186884
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5385492
SamplesNA18507
Known GenesC10orf11
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)esv2437036
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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