Variant DetailsVariant: esv2421903 | Internal ID | 7905665 | | Landmark | | | Location Information | | | Cytoband | 6p21.33 | | Allele length | | Assembly | Allele length | | hg38 | 47705 | | hg19 | 47705 | | hg18 | 47705 |
| | Variant Type | CNV deletion | | Copy Number | | | Allele State | | | Allele Origin | | | Probe Count | | | Validation Flag | | | Merged Status | M | | Merged Variants | dgv7e195 | | Supporting Variants | essv5102033, essv5082302, essv5074980, essv5020200, essv5097194, essv5016264, essv5094523, essv5001895, essv5024162, essv5062583, essv5017330, essv5053321, essv5032059, essv5052623, essv5148310, essv5085627, essv5061728, essv5155231, essv5082270, essv5158760, essv5007778, essv5105675, essv5151997, essv5148629, essv5137823, essv5019240, essv5100170, essv5033355, essv5027581, essv5126661, essv5090978, essv5117619, essv5157648, essv5153797, essv5059155, essv5042942, essv5018093, essv5144745, essv5052675, essv5074770, essv5156416, essv5106485, essv5016654, essv5010421, essv5041603, essv5096738, essv5149437, essv5121160, essv5113553, essv5092995, essv5045586, essv5140001, essv5110607, essv5031956, essv5043052, essv5012319, essv5017360, essv5114506, essv5136912, essv5082376, essv5058709, essv5053406, essv5045369, essv5110438, essv5033892, essv5053864, essv5035406, essv5026997, essv5097765, essv5113892, essv5060016, essv5084016, essv5074712, essv5078645, essv5025754, essv5022410, essv5067193, essv5139298, essv5130774, essv5129890, essv5149318, essv5037560, essv5126030, essv5111350, essv5137790, essv5026504, essv5016383, essv5075683, essv5145152, essv5018835, essv5045523, essv5148561, essv5135059, essv5057251, essv5151958, essv5036844, essv5125202, essv5083452, essv5087268, essv5059169, essv5035562, essv5070644, essv5002660, essv5130172, essv5057169, essv5004852, essv5132933, essv5121303, essv5132118, essv5027278, essv5039912, essv5107058, essv5089895, essv5085492, essv5032680, essv5146121, essv5094410, essv5107353, essv5092379, essv5069288, essv5121452, essv5004706, essv5027665, essv5154080, essv5075666, essv5155378, essv5109251, essv5067978, essv5054084, essv5066035, essv5031056, essv5141074, essv5041205, essv5115721, essv5119879, essv5159104, essv5072769, essv5032109, essv5011077, essv5069380, essv5026687, essv5025512, essv5148906, essv5137772, essv5071363, essv5081732, essv5006606, essv5041299, essv5029424, essv5040482, essv5151690, essv5111363, essv5143278, essv5158888, essv5016676, essv5047472, essv5063916, essv5112810, essv5002588, essv5097489, essv5133228, essv5055846, essv5074240, essv5068106, essv5113072, essv5041392, essv5108313, essv5009726, essv5073316, essv5084472, essv5128629, essv5108645, essv5116033, essv5107233, essv5057341, essv5036112, essv5120500, essv5055291, essv5155035, essv5057082, essv5041682, essv5039753, essv5005761, essv5081434, essv5134477, essv5073606, essv5002197, essv5093651, essv5067641, essv5061663, essv5143845, essv5066238, essv5140291, essv5027152, essv5056966, essv5022232, essv5074614, essv5026306, essv5108656, essv5030744, essv5116878, essv5115573, essv5114903, essv5153130, essv5009303, essv5141835, essv5155657, essv5070168, essv5045895, essv5141030, essv5155225, essv5101200, essv5066776, essv5156150, essv5134188, essv5060179, essv5017963, essv5054373, essv5133673, essv5074815, essv5101430, essv5086999, essv5101719, essv5024447, essv5104235, essv5053768, essv5140219, essv5023852, essv5160721, essv5042482, essv5046574, essv5103026, essv5106164, essv5047504, essv5031501, essv5099389, essv5057279, essv5161211, essv5103273, essv5080073, essv5031645, essv5072997, essv5042824, essv5039594, essv5090254, essv5058273, essv5017411, essv5089181, essv5118138, essv5149525, essv5083389, essv5148260, essv5067253, essv5009697, essv5126601, essv5049308, essv5098291, essv5068478, essv5064287, essv5127865, essv5126981, essv5053482, essv5135573, essv5040105, essv5119518, essv5087553, essv5011299, essv5006513, essv5013850, essv5152246, essv5071108, essv5034718, essv5063321, essv5106471, essv5145611, essv5107323, essv5078528, essv5069417, essv5068721, essv5062110, essv5133188, essv5104105, essv5155415, essv5103044, essv5024167, essv5094577, essv5107779, essv5088927, essv5150641, essv5111045, essv5120561, essv5045436, essv5154439, essv5126283, essv5063285, essv5062501, essv5055669, essv5015877, essv5024423, essv5117308, essv5062215, essv5021637, essv5152866, essv5113991, essv5003722, essv5104991, essv5092990, essv5086489, essv5073257, essv5016985, essv5083694, essv5075515, essv5137793, essv5143811, essv5125056, essv5035708, essv5016708, essv5073902, essv5065215, essv5025149, essv5103374, essv5057012, essv5030478, essv5149396, essv5146422 | | Samples | NA18745, NA19701, NA19058, NA21317, NA21524, NA18621, NA20766, NA18947, NA12286, NA20508, NA19664, NA19066, NA18862, NA18855, NA18979, NA20752, NA18999, NA17968, NA20512, NA18639, NA18959, NA18616, NA21301, NA20517, NA20364, NA19067, NA18602, NA18969, NA18627, NA21776, NA21434, NA12813, NA19171, NA18940, NA21378, NA10835, NA18597, NA18995, NA19678, NA20774, NA12802, NA18923, NA20756, NA20795, NA18558, NA18960, NA18618, NA19062, NA18916, NA18582, NA19650, NA19457, NA18571, NA21493, NA20287, NA19079, NA18949, NA11930, NA12275, NA21109, NA19128, NA17993, NA19226, NA18990, NA21420, NA21417, NA21344, NA19789, NA20755, NA20301, NA12777, NA18951, NA20892, NA17976, NA20535, NA12760, NA12489, NA21414, NA12752, NA21587, NA19120, NA19056, NA21448, NA20297, NA19403, NA19175, NA19086, NA18118, NA20521, NA19184, NA20760, NA18485, NA19663, NA19751, NA19081, NA20875, NA18572, NA20358, NA21438, NA21366, NA20876, NA19064, NA19202, NA12818, NA20903, NA20866, NA21086, NA18875, NA20581, NA12829, NA18156, NA18930, NA12056, NA19656, NA17965, NA19099, NA19059, NA19761, NA19009, NA18141, NA21356, NA19625, NA18593, NA12546, NA21316, NA18108, NA20872, NA18146, NA21117, NA19149, NA18863, NA21528, NA19072, NA12873, NA18128, NA21368, NA19010, NA19835, NA20792, NA17989, NA21718, NA20902, NA21390, NA19324, NA20281, NA07348, NA18610, NA12347, NA19182, NA17995, NA17982, NA20906, NA07435, NA19178, NA20849, NA18134, NA19093, NA20510, NA18636, NA12875, NA20758, NA19116, NA20826, NA20345, NA19900, NA18957, NA19129, NA11892, NA18623, NA19063, NA20277, NA19346, NA19074, NA18487, NA20350, NA21091, NA18997, NA18120, NA18998, NA20874, NA19055, NA18924, NA10845, NA18592, NA20292, NA12767, NA21436, NA19763, NA18561, NA18507, NA21597, NA18599, NA20813, NA18641, NA18545, NA17966, NA20805, NA18596, NA12248, NA12865, NA18125, NA21693, NA19836, NA18526, NA18962, NA07357, NA18967, NA19660, NA19076, NA18944, NA19902, NA21526, NA19119, NA19198, NA12891, NA21355, NA19352, NA18942, NA19649, NA20540, NA19313, NA19088, NA19138, NA21103, NA19760, NA12761, NA18970, NA19180, NA18874, NA18977, NA21512, NA19915, NA18112, NA21453, NA19471, NA19317, NA12815, NA20343, NA19159, NA21716, NA19901, NA19665, NA12828, NA19456, NA18973, NA18954, NA18158, NA19200, NA18638, NA21494, NA18106, NA18613, NA21682, NA20524, NA10836, NA19077, NA19327, NA18991, NA20895, NA21439, NA18151, NA12376, NA19776, NA21116, NA18757, NA18133, NA19118, NA19000, NA21141, NA20859, NA11894, NA18946, NA19001, NA20282, NA12817, NA19225, NA18536, NA21142, NA18634, NA20765, NA18608, NA19685, NA19094, NA19680, NA20522, NA19183, NA18162, NA18909, NA19834, NA18961, NA18952, NA20295, NA12864, NA19749, NA19773, NA10840, NA18643, NA12874, NA19085, NA21513, NA20887, NA20357, NA19759, NA19143, NA19078, NA20302, NA18971, NA20582, NA19173, NA18994, NA18506, NA17987, NA18149, NA17988, NA21455, NA18972, NA20528, NA21385, NA19661, NA19224, NA18955, NA19775, NA19139, NA10864, NA18622 | | Known Genes | HCG4B, HLA-H | | Method | SNP array | | Analysis | To assess copy number variation we merged and analysed the probe level intensity data from both the Affymetrix and Illumina arrays. | | Platform | Not specified | | Comments | | | Reference | Altshuler_et_al_2010 | | Pubmed ID | 20811451 | | Accession Number(s) | esv2421903
| | Frequency | | Sample Size | 1184 | | Observed Gain | 0 | | Observed Loss | 325 | | Observed Complex | 0 | | Frequency | n/a |
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