A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2421829



Internal ID8252277
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:98075189..98077645hg38UCSC Ensembl
Innerchr10:99834946..99837402hg19UCSC Ensembl
Innerchr10:99824936..99827392hg18UCSC Ensembl
Cytoband10q24.2
Allele length
AssemblyAllele length
hg382457
hg192457
hg182457
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5147773, essv5084679, essv5009196, essv5081920, essv5044314, essv5145216, essv5098521, essv5150323, essv5007277, essv5105123, essv5028110, essv5069179, essv5078266, essv5024625, essv5097864, essv5050420, essv5153610, essv5032953, essv5145545, essv5142607, essv5150394, essv5135940, essv5132133, essv5146911, essv5020741, essv5146169, essv5129121, essv5014639, essv5018959, essv5109392, essv5073054, essv5064902, essv5071734, essv5017102, essv5123086, essv5011356, essv5006357, essv5038064, essv5008770, essv5094877, essv5010791, essv5155738, essv5053799, essv5049331, essv5080524, essv5034138, essv5100252, essv5003568, essv5108423, essv5125913, essv5062046, essv5115493, essv5108301, essv5118271, essv5122777, essv5110798, essv5088195, essv5029004, essv5126581, essv5005119, essv5116202, essv5043118, essv5041414, essv5041472, essv5128270, essv5011369, essv5157019, essv5123356, essv5103007, essv5058363, essv5092099, essv5064562, essv5059956, essv5045010, essv5023293, essv5062226, essv5069390, essv5031480, essv5082077, essv5070479, essv5057009, essv5090491, essv5056275, essv5141017, essv5025128, essv5043683, essv5022408, essv5090472, essv5160585, essv5136119, essv5104153, essv5137865, essv5051834, essv5131801, essv5124813, essv5082020, essv5068431, essv5157693, essv5153276, essv5137692, essv5024955, essv5017109, essv5080119, essv5019665, essv5147916, essv5087359, essv5068269, essv5130639, essv5157105, essv5017059, essv5061997, essv5116241, essv5038686, essv5018538, essv5003735, essv5108530, essv5155582, essv5088525, essv5046881, essv5012437, essv5117921, essv5062385, essv5054872, essv5049845, essv5135204, essv5133277, essv5160424, essv5136787, essv5054370, essv5157477, essv5008697, essv5126417, essv5088061, essv5049663, essv5125855, essv5010218, essv5008895, essv5083571, essv5141198, essv5072440, essv5152028, essv5136334, essv5132033, essv5076491, essv5072758, essv5028527, essv5098095, essv5112741, essv5076411, essv5032242, essv5013417, essv5157761, essv5040337, essv5091997, essv5065321, essv5039399, essv5009862, essv5153967, essv5099281, essv5050494, essv5002273, essv5140088, essv5082152, essv5101681, essv5090599
SamplesNA18998, NA19141, NA19222, NA11830, NA18947, NA11995, NA11829, NA19204, NA18862, NA18508, NA12814, NA18524, NA18855, NA18561, NA18603, NA12751, NA18545, NA07029, NA12801, NA18504, NA12248, NA18959, NA12865, NA18526, NA18633, NA12750, NA12155, NA07357, NA18967, NA19127, NA18944, NA18940, NA18550, NA10835, NA10846, NA10854, NA12802, NA19119, NA18635, NA12891, NA19131, NA18960, NA18942, NA11992, NA18571, NA12762, NA19138, NA18964, NA06993, NA18949, NA12761, NA18970, NA12156, NA19137, NA19238, NA11994, NA19207, NA19172, NA18966, NA12815, NA19159, NA10855, NA19239, NA19209, NA10839, NA18975, NA18973, NA11993, NA11831, NA10847, NA18951, NA18605, NA19210, NA12752, NA07022, NA19194, NA10863, NA19152, NA12872, NA19161, NA18956, NA18859, NA18515, NA18637, NA18579, NA18871, NA19103, NA18572, NA18976, NA11839, NA10838, NA18981, NA12234, NA19208, NA19221, NA19202, NA18566, NA19142, NA19000, NA11840, NA18912, NA12892, NA19154, NA18532, NA18853, NA12264, NA12145, NA19101, NA18555, NA07345, NA19160, NA19132, NA18570, NA18858, NA18945, NA18576, NA18608, NA18953, NA11882, NA19206, NA18542, NA06991, NA18961, NA18952, NA12864, NA18564, NA18913, NA19144, NA10861, NA18943, NA19193, NA07348, NA12763, NA07055, NA18594, NA18501, NA12740, NA06994, NA18971, NA18987, NA19211, NA18994, NA19093, NA18636, NA18609, NA18506, NA19102, NA18854, NA18972, NA18872, NA07056, NA18505, NA19129, NA18624, NA19139, NA12006, NA18623, NA07000, NA12154, NA18622, NA19153, NA18562, NA18965, NA11832, NA18620
Known Genes
MethodSNP array
AnalysisTo assess copy number variation we merged and analysed the probe level intensity data from both the Affymetrix and Illumina arrays.
PlatformNot specified
Comments
ReferenceAltshuler_et_al_2010
Pubmed ID20811451
Accession Number(s)esv2421829
Frequency
Sample Size1184
Observed Gain0
Observed Loss165
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer