Variant DetailsVariant: esv2421782 | Internal ID | 7905544 | | Landmark | | | Location Information | | | Cytoband | 6p21.33 | | Allele length | | Assembly | Allele length | | hg38 | 48051 | | hg19 | 48051 | | hg18 | 48051 |
| | Variant Type | CNV deletion | | Copy Number | | | Allele State | | | Allele Origin | | | Probe Count | | | Validation Flag | | | Merged Status | M | | Merged Variants | dgv7e195 | | Supporting Variants | essv5053194, essv5027147, essv5070580, essv5114224, essv5155102, essv5093938, essv5154539, essv5082699, essv5152969, essv5060445, essv5159910, essv5076082, essv5122612, essv5067103, essv5084344, essv5153588, essv5087414, essv5094587, essv5158316, essv5148282, essv5066474, essv5050006, essv5055136, essv5034482, essv5140056, essv5069298, essv5030648, essv5024420, essv5007981, essv5159961, essv5143647, essv5002691, essv5088547, essv5029844, essv5123464, essv5030933, essv5064815, essv5142269, essv5026042, essv5100228, essv5130405, essv5083481, essv5116422, essv5120111, essv5079440, essv5023862, essv5081082, essv5037158, essv5127867, essv5071437, essv5058504, essv5035249, essv5151436, essv5099106, essv5051349, essv5128232, essv5027655, essv5041888, essv5021142, essv5004110, essv5096011, essv5078836, essv5148299, essv5128559, essv5137136, essv5129096, essv5012726, essv5142679, essv5122804, essv5122549, essv5052094, essv5083157, essv5127155, essv5123411, essv5075253, essv5069047, essv5100920, essv5055543, essv5156781, essv5153739, essv5117606, essv5061247, essv5149060, essv5018260, essv5083391, essv5102166, essv5101516, essv5022623, essv5082708, essv5108843, essv5100832, essv5139927, essv5143727, essv5137640, essv5056554, essv5138767, essv5142742, essv5040838, essv5018180, essv5045943, essv5143942, essv5089493, essv5038012, essv5147509, essv5013077, essv5147037, essv5049201, essv5039248, essv5011185, essv5136175, essv5074924, essv5087867, essv5058562, essv5033084, essv5145915, essv5125645, essv5149463, essv5015929, essv5132465, essv5082160, essv5035328, essv5065034, essv5087698, essv5026474, essv5113859, essv5102448, essv5053803, essv5002151, essv5108649, essv5114377, essv5051779, essv5105747, essv5086821, essv5014981, essv5143353, essv5041033, essv5139088, essv5119776, essv5153897, essv5151515, essv5052680, essv5147786, essv5155886, essv5042193, essv5102569, essv5122309, essv5119529, essv5016001, essv5140107, essv5005137, essv5060285, essv5134968, essv5027697, essv5116907, essv5098897, essv5097604, essv5049751, essv5011444, essv5066721, essv5157388, essv5017254, essv5061138, essv5153158, essv5108621, essv5093443, essv5083788, essv5031916, essv5024409, essv5140758, essv5072987, essv5154078, essv5080401, essv5132563, essv5024605, essv5067343, essv5063987, essv5133174, essv5030206, essv5054851, essv5124420, essv5012826, essv5062982, essv5090949, essv5104167, essv5145440, essv5131141, essv5101155, essv5012004, essv5071461, essv5070548, essv5039571, essv5137781, essv5092702, essv5060993, essv5114610, essv5044144, essv5131786, essv5041357, essv5096209, essv5125438, essv5026537, essv5097303, essv5072599, essv5111725, essv5102877, essv5049097, essv5119505, essv5087682, essv5086585, essv5107162, essv5138485, essv5106067, essv5136003, essv5136278, essv5157688, essv5018308, essv5156142, essv5035387, essv5153438, essv5008903, essv5030502, essv5159560, essv5097416, essv5090619, essv5072031, essv5055729, essv5006632, essv5056583, essv5020559, essv5028729, essv5005193, essv5086100, essv5040265, essv5091864, essv5041645, essv5071854, essv5095720, essv5118743, essv5112342, essv5105755, essv5058194, essv5020228, essv5149158, essv5033692, essv5105753, essv5086986, essv5121014, essv5084967, essv5102180, essv5102875, essv5089885, essv5132881, essv5139064, essv5078688, essv5025178, essv5019716, essv5126056, essv5142203, essv5057490, essv5093866, essv5111865, essv5154241, essv5046635, essv5140606, essv5108366, essv5063088, essv5112187, essv5072512, essv5132880, essv5140952, essv5114111, essv5056570, essv5020969, essv5024920, essv5083347, essv5088107, essv5042831, essv5017577, essv5008966, essv5092339, essv5081320, essv5021101, essv5051071, essv5133493, essv5157108, essv5106563, essv5062278, essv5008677, essv5082842, essv5084610, essv5116704, essv5058962, essv5078013, essv5014118, essv5129809, essv5104222, essv5122675, essv5117032, essv5034190, essv5156343, essv5095374, essv5053910, essv5109159, essv5146010, essv5103621, essv5071361, essv5020818, essv5090016, essv5122174, essv5021097, essv5124877, essv5125048, essv5147121, essv5115508, essv5051310, essv5158716, essv5133629, essv5104521, essv5027598, essv5080596, essv5076336, essv5080979, essv5063722, essv5036776, essv5119877 | | Samples | NA18745, NA19701, NA19058, NA21317, NA21524, NA18621, NA20766, NA18947, NA12286, NA20508, NA19664, NA19066, NA18862, NA18855, NA18979, NA20752, NA18999, NA17968, NA20512, NA18639, NA18959, NA18616, NA21301, NA20517, NA20364, NA19067, NA18602, NA18969, NA18627, NA21776, NA21434, NA12813, NA19171, NA18940, NA21378, NA10835, NA18597, NA18995, NA19678, NA20774, NA12802, NA18923, NA20756, NA20795, NA18558, NA18960, NA18618, NA19062, NA18916, NA18582, NA19650, NA19457, NA18571, NA21493, NA20287, NA19079, NA18949, NA11930, NA12275, NA21109, NA19128, NA17993, NA19226, NA18990, NA21420, NA21417, NA21344, NA19789, NA20755, NA20301, NA12777, NA18951, NA20892, NA17976, NA20535, NA12760, NA12489, NA21414, NA12752, NA21587, NA19120, NA19056, NA21448, NA20297, NA19403, NA19175, NA19086, NA18118, NA20521, NA19184, NA20760, NA18485, NA19663, NA19751, NA19081, NA20875, NA18572, NA20358, NA21438, NA21366, NA20876, NA19064, NA19202, NA12818, NA20903, NA20866, NA21086, NA18875, NA20581, NA12829, NA18156, NA18930, NA12056, NA19656, NA17965, NA19099, NA19059, NA19761, NA19009, NA18141, NA21356, NA19625, NA18593, NA12546, NA21316, NA18108, NA20872, NA18146, NA21117, NA19149, NA18863, NA21528, NA19072, NA12873, NA18128, NA21368, NA19010, NA19835, NA20792, NA17989, NA21718, NA20902, NA21390, NA19324, NA20281, NA07348, NA18610, NA12347, NA19182, NA17995, NA17982, NA20906, NA07435, NA19178, NA20849, NA18134, NA19093, NA20510, NA18636, NA12875, NA20758, NA19116, NA20826, NA20345, NA19900, NA18957, NA19129, NA11892, NA18623, NA19063, NA20277, NA19346, NA19074, NA18487, NA20350, NA21091, NA18997, NA18120, NA18998, NA20874, NA19055, NA18924, NA10845, NA18592, NA20292, NA12767, NA21436, NA19763, NA18561, NA18507, NA21597, NA18599, NA20813, NA18641, NA18545, NA17966, NA20805, NA18596, NA12248, NA12865, NA18125, NA21693, NA19836, NA18526, NA18962, NA07357, NA18967, NA19660, NA19076, NA18944, NA19902, NA21526, NA19119, NA19198, NA12891, NA21355, NA19352, NA18942, NA19649, NA20540, NA19313, NA19088, NA19138, NA21103, NA19760, NA12761, NA18970, NA19180, NA18874, NA18977, NA21512, NA19915, NA18112, NA21453, NA19471, NA19317, NA12815, NA20343, NA19159, NA21716, NA19901, NA19665, NA12828, NA19456, NA18973, NA18954, NA18158, NA19200, NA18638, NA21494, NA18106, NA18613, NA21682, NA20524, NA10836, NA19077, NA19327, NA18991, NA20895, NA21439, NA18151, NA12376, NA19776, NA21116, NA18757, NA18133, NA19118, NA19000, NA21141, NA20859, NA11894, NA18946, NA19001, NA20282, NA12817, NA19225, NA18536, NA21142, NA18634, NA20765, NA18608, NA19685, NA19094, NA19680, NA20522, NA19183, NA18162, NA18909, NA19834, NA18961, NA18952, NA20295, NA12864, NA19749, NA19773, NA10840, NA18643, NA12874, NA19085, NA21513, NA20887, NA20357, NA19759, NA19143, NA19078, NA20302, NA18971, NA20582, NA19173, NA18994, NA18506, NA17987, NA18149, NA17988, NA21455, NA18972, NA20528, NA21385, NA19661, NA19224, NA18955, NA19775, NA19139, NA10864, NA18622 | | Known Genes | HCG4B, HLA-H | | Method | SNP array | | Analysis | To assess copy number variation we merged and analysed the probe level intensity data from both the Affymetrix and Illumina arrays. | | Platform | Not specified | | Comments | | | Reference | Altshuler_et_al_2010 | | Pubmed ID | 20811451 | | Accession Number(s) | esv2421782
| | Frequency | | Sample Size | 1184 | | Observed Gain | 0 | | Observed Loss | 325 | | Observed Complex | 0 | | Frequency | n/a |
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