Variant DetailsVariant: esv2421657 | Internal ID | 7905419 | | Landmark | | | Location Information | | | Cytoband | 6p21.32 | | Allele length | | Assembly | Allele length | | hg38 | 74846 | | hg19 | 74846 | | hg18 | 74846 |
| | Variant Type | CNV deletion | | Copy Number | | | Allele State | | | Allele Origin | | | Probe Count | | | Validation Flag | | | Merged Status | M | | Merged Variants | | | Supporting Variants | essv5152706, essv5037507, essv5115050, essv5001951, essv5107065, essv5029873, essv5104479, essv5058822, essv5086104, essv5121169, essv5109473, essv5145582, essv5051042, essv5151405, essv5073989, essv5091387, essv5031276, essv5073274, essv5057112, essv5034715, essv5085300, essv5044610, essv5076636, essv5082671, essv5095775, essv5088216, essv5018646, essv5147928, essv5069955, essv5053100, essv5012558, essv5062051, essv5124921, essv5077539, essv5128387, essv5103139, essv5061283, essv5029289, essv5013606, essv5045041, essv5097907, essv5075558, essv5035899, essv5142782, essv5102557, essv5154557, essv5101608, essv5116522, essv5072914, essv5052506, essv5042855, essv5126193, essv5014409, essv5087339, essv5116980, essv5033986, essv5061644, essv5117516, essv5016429, essv5017962, essv5137831, essv5141557, essv5157358, essv5010377, essv5019688, essv5003292, essv5071792, essv5112335, essv5138119, essv5056715, essv5129071, essv5078622, essv5125786, essv5024801, essv5012550, essv5107224, essv5019676, essv5154307, essv5079984, essv5131030, essv5105856, essv5038251, essv5140057, essv5115386, essv5108127, essv5092609, essv5045949, essv5160652, essv5128543, essv5041223, essv5028177, essv5067613, essv5041245, essv5018900, essv5146028, essv5055940, essv5110342, essv5039931, essv5030016, essv5048153, essv5077281, essv5156691, essv5083428, essv5009158, essv5061563, essv5020893, essv5126875, essv5068710, essv5007185, essv5050107, essv5096545, essv5064117, essv5154884, essv5140446, essv5069343, essv5078120, essv5150292, essv5048315, essv5108594, essv5044474, essv5064913, essv5159035, essv5135247, essv5031391, essv5131697, essv5058047, essv5049320, essv5045951, essv5156876, essv5103459, essv5119976, essv5115375, essv5153080, essv5042530, essv5047538, essv5149163, essv5140109, essv5028931, essv5003080, essv5092612, essv5029078, essv5006617, essv5144672, essv5147160, essv5005009, essv5129714, essv5151434, essv5077224, essv5014047, essv5112925, essv5050469, essv5131905, essv5049918, essv5046515, essv5125898, essv5130487, essv5145581, essv5111581, essv5159747, essv5084807, essv5035228, essv5047548, essv5108233, essv5011053, essv5003625, essv5047149, essv5102078, essv5065796, essv5117420, essv5135290, essv5009442, essv5096378, essv5081173, essv5064563, essv5002976, essv5034110, essv5093264, essv5074181, essv5089355, essv5035606, essv5005678, essv5118281, essv5159422, essv5110461, essv5068136, essv5053253, essv5008131, essv5114975, essv5128895, essv5111586, essv5030096, essv5109977, essv5147195, essv5132185, essv5117297, essv5125133, essv5019501, essv5016408, essv5092246, essv5070472, essv5017635, essv5148456, essv5049950, essv5048874, essv5083656, essv5101874, essv5001944, essv5094695, essv5026662, essv5014819, essv5007841, essv5041427, essv5067085, essv5016508, essv5096650, essv5046370, essv5022501, essv5144755, essv5136571, essv5120303, essv5030858, essv5068725, essv5039302, essv5068078, essv5147522, essv5129028, essv5041923, essv5040242, essv5108447, essv5127508, essv5026823, essv5076759, essv5040330, essv5075441, essv5158626, essv5152776, essv5043193, essv5129372, essv5015101, essv5109167, essv5039790, essv5120799, essv5064279, essv5091427, essv5149008, essv5151123, essv5086328, essv5113186, essv5121337, essv5065513, essv5009133, essv5050381, essv5049504, essv5146187, essv5051323, essv5086903, essv5106486, essv5117019, essv5029396, essv5050194, essv5121032, essv5099010, essv5076355, essv5130489, essv5049430, essv5118448, essv5019885, essv5068949, essv5054752, essv5051355, essv5009580, essv5136786, essv5004989, essv5047103, essv5030852, essv5133537, essv5105984, essv5034777, essv5072350, essv5140202, essv5130311, essv5100284, essv5055864, essv5014569, essv5143512, essv5051613, essv5051292, essv5047635, essv5043806, essv5123342, essv5080078, essv5014861, essv5089835, essv5041422, essv5148027, essv5123890, essv5122114, essv5120194, essv5072607, essv5108597, essv5098035, essv5070223, essv5127419, essv5082681, essv5018806, essv5067994, essv5059077, essv5010091, essv5061322, essv5039429, essv5136652, essv5125387, essv5150320, essv5136951, essv5071383, essv5012908, essv5084307, essv5059606, essv5100232, essv5079144, essv5134157, essv5051059, essv5055994, essv5069157, essv5155361, essv5144054, essv5094421, essv5007929, essv5071680, essv5127618, essv5056749, essv5138358, essv5152524, essv5151192, essv5091193, essv5060676, essv5072680, essv5070862, essv5117635, essv5006267, essv5090854, essv5161034, essv5139848, essv5150215, essv5056338, essv5038322, essv5097568, essv5049711, essv5069964, essv5121709, essv5038001, essv5141735, essv5091379, essv5113603, essv5115024, essv5066002, essv5024050, essv5093156, essv5124182, essv5051358, essv5026060, essv5006123, essv5009116, essv5046914, essv5048912, essv5014794, essv5139529, essv5075522, essv5003965, essv5117200, essv5054621, essv5091068, essv5068409, essv5143144, essv5099161, essv5037073, essv5160362, essv5156644, essv5105322, essv5091512, essv5008414, essv5081656, essv5079487, essv5055815, essv5084387, essv5135054, essv5012087, essv5015674, essv5111036, essv5055353, essv5039891, essv5090388, essv5101507, essv5061528, essv5136327, essv5103336, essv5082365, essv5036806, essv5137756, essv5058359, essv5096475, essv5157576, essv5093404, essv5024593, essv5003770, essv5019156, essv5101888, essv5075698, essv5122299, essv5015264, essv5097391, essv5043033, essv5006952, essv5069464, essv5093462, essv5142849, essv5151427, essv5067889, essv5107788, essv5057199, essv5005020, essv5155320, essv5073045, essv5057231, essv5145482, essv5096235, essv5005301, essv5129346, essv5103824, essv5153773, essv5043321, essv5108678, essv5009513, essv5106513, essv5101223, essv5127863, essv5022094, essv5023225, essv5026666, essv5014136, essv5134272, essv5073177, essv5140487, essv5041522, essv5014535, essv5153308, essv5005668, essv5087816, essv5043479, essv5017554, essv5149251, essv5137988, essv5078715, essv5155796, essv5051104, essv5117731, essv5114029, essv5112714, essv5094383, essv5111438, essv5053030, essv5040716, essv5142716, essv5081625, essv5073178, essv5024200, essv5154478, essv5115996, essv5093119, essv5019347, essv5104011, essv5129332, essv5029901, essv5143870, essv5112891, essv5140648, essv5112085, essv5117587, essv5066261, essv5065051, essv5139623, essv5112195, essv5151527, essv5110831, essv5146704, essv5111997, essv5019011, essv5152842, essv5109807, essv5055706, essv5101040, essv5002132, essv5130231, essv5154321, essv5044300, essv5014705, essv5060823, essv5117112, essv5077664, essv5079494, essv5127885, essv5005355, essv5119878, essv5076251, essv5137304, essv5040162, essv5110271, essv5123019, essv5139979, essv5125450, essv5144339, essv5072922, essv5064407, essv5126941, essv5056253, essv5030652, essv5094153, essv5025537, essv5107235, essv5139745, essv5046003, essv5142916, essv5132624, essv5006057, essv5100978, essv5122208, essv5068500, essv5089414, essv5150304, essv5119042, essv5045933, essv5067497, essv5093841, essv5039869, essv5016602, essv5151421, essv5021125, essv5017175, essv5011765, essv5042363, essv5088691, essv5104150, essv5134936, essv5098728, essv5002745, essv5060668, essv5033782, essv5140074, essv5127207, essv5057980, essv5100812, essv5048118, essv5124453, essv5059514, essv5127662, essv5117091, essv5138842, essv5094310, essv5135963, essv5148141, essv5087103, essv5127146, essv5080699, essv5031042, essv5064176, essv5070004, essv5090228, essv5078980, essv5030627, essv5018971, essv5083028, essv5134113, essv5097033, essv5011517, essv5125160, essv5059866, essv5067189, essv5012268, essv5069802, essv5082514, essv5001933, essv5088464, essv5027411, essv5094287, essv5008016, essv5008158, essv5112030, essv5148455, essv5053186, essv5021390, essv5135438, essv5093820, essv5006649, essv5028918, essv5026568, essv5104724, essv5056849, essv5135434, essv5046682, essv5033664, essv5056659, essv5078811, essv5107215, essv5023644, essv5110157, essv5038679, essv5101188, essv5076436, essv5126070, essv5122575, essv5013497, essv5144444, essv5118344, essv5008125, essv5122577, essv5144201, essv5101106, essv5123114, essv5089285, essv5028000, essv5020093, essv5095364, essv5023042, essv5132487, essv5113806, essv5094107, essv5087563, essv5022287, essv5134383, essv5056233, essv5022917, essv5006151, essv5052479, essv5104573, essv5057568, essv5033921, essv5097983, essv5051449, essv5025016, essv5111953, essv5116144, essv5139576, essv5118391, essv5104983, essv5038431, essv5092343, essv5099828, essv5106172, essv5003441, essv5150806, essv5089751, essv5134997, essv5050934, essv5046117, essv5113954, essv5130966, essv5036479, essv5128301, essv5141485, essv5022680, essv5132783, essv5006908, essv5074197, essv5007065, essv5084494, essv5081956, essv5123049, essv5054406, essv5160018, essv5028078, essv5099352, essv5065157, essv5015215, essv5012062, essv5053999, essv5124895, essv5012030, essv5037856, essv5137300, essv5018968, essv5154531, essv5160181, essv5079683, essv5018766, essv5080765, essv5128293, essv5064087, essv5145575, essv5085138, essv5128971, essv5037714, essv5076311, essv5027478, essv5110396, essv5067097, essv5098578, essv5066194, essv5061234, essv5005565, essv5145933, essv5050925, essv5020591, essv5011609, essv5071562, essv5066963, essv5098474, essv5153917, essv5151723, essv5042691, essv5124779, essv5112217, essv5016791, essv5141067, essv5110613, essv5079666, essv5128338, essv5121525, essv5079889, essv5086352, essv5094379, essv5010053, essv5034398, essv5054741, essv5023936, essv5145686, essv5095303, essv5155667, essv5037878, essv5145262, essv5094899, essv5004379, essv5073480, essv5141870, essv5093767, essv5080262, essv5109639, essv5101316, essv5017753, essv5036291, essv5156543, essv5031381, essv5161106, essv5142358, essv5049522, essv5095816, essv5017612, essv5129036, essv5160233, essv5054888, essv5049795, essv5150132, essv5053486, essv5103659, essv5024346, essv5002735, essv5081935, essv5051876, essv5112902, essv5148885, essv5035116, essv5085603, essv5105347, essv5120743, essv5029917, essv5044721, essv5095102, essv5143612, essv5034052, essv5124602, essv5068437, essv5071246, essv5148370, essv5044483, essv5115912, essv5061406, essv5108097, essv5029519, essv5125027, essv5120871, essv5013280, essv5010646, essv5020418, essv5108967, essv5118626, essv5010142, essv5039847, essv5074122, essv5063998, essv5103422, essv5017385, essv5006314, essv5150250, essv5067798, essv5106846, essv5087010, essv5005808, essv5084701, essv5119632, essv5002099, essv5126215, essv5005990, essv5063326, essv5115210, essv5121668, essv5120522, essv5115820, essv5010935, essv5004397, essv5130481, essv5091889, essv5080615, essv5113236, essv5119592, essv5115358, essv5039620, essv5016914, essv5114042, essv5128073, essv5074295, essv5039260, essv5019921, essv5069583, essv5158167, essv5068806, essv5113778, essv5048064, essv5035053, essv5072598, essv5039288, essv5066835, essv5096257, essv5015812, essv5151249, essv5006065, essv5059243, essv5111795, essv5109216, essv5142847, essv5147553, essv5106578, essv5018648, essv5065929, essv5002728, essv5143858, essv5076327, essv5146460, essv5144020, essv5083786, essv5079787, essv5097557, essv5006503, essv5119994, essv5153395, essv5145499, essv5103162, essv5152314, essv5145573, essv5055408, essv5013426, essv5074515, essv5048518, essv5026684, essv5064942, essv5016215, essv5151613, essv5139292, essv5144989, essv5112864, essv5158056, essv5140430, essv5111691, essv5026243, essv5040473, essv5076834, essv5154220, essv5097427, essv5085688, essv5017959, essv5031208, essv5045931, essv5153455, essv5037157, essv5159820, essv5078914, essv5030822, essv5123212, essv5024770, essv5158155, essv5134156, essv5140365, essv5045005, essv5043840, essv5119052, essv5040544, essv5138348, essv5056865, essv5145957, essv5119330, essv5154906, essv5153505, essv5041173, essv5020899, essv5151214, essv5002891, essv5159476, essv5055461, essv5076977, essv5057933, essv5011809, essv5032352, essv5156676, essv5042240, essv5148311, essv5145555, essv5061547, essv5031210, essv5121911, essv5002098, essv5160874, essv5031448, essv5049427, essv5015445, essv5021338, essv5117970, essv5009595, essv5094989, essv5135340, essv5004370, essv5127264, essv5150565, essv5048619, essv5144566, essv5058191, essv5020347, essv5052653, essv5045858, essv5159766, essv5107453, essv5048071, essv5005287, essv5155136, essv5118635, essv5090979, essv5040479, essv5094939, essv5010150, essv5052017, essv5137625, essv5116370, essv5086548, essv5103914, essv5052288, essv5034948, essv5023287, essv5023360, essv5102031, essv5073258, essv5008092, essv5119984, essv5065317, essv5063567, essv5080097, essv5054188, essv5149646, essv5134450, essv5078803, essv5003797, essv5066661, essv5120700, essv5072252, essv5069312, essv5100579, essv5069626, essv5152209, essv5116426, essv5139246, essv5019733, essv5094840, essv5002943, essv5010672, essv5029837, essv5018558, essv5093360, essv5018107, essv5053058, essv5035975, essv5137089, essv5141275, essv5116759, essv5155712, essv5136727, essv5066712, essv5033482, essv5050888, essv5074984, essv5061250, essv5139543, essv5138882, essv5073260, essv5128371, essv5113931, essv5090140, essv5027321, essv5068542, essv5142222, essv5109608, essv5100723, essv5144241, essv5047002, essv5102025, essv5063742, essv5058148, essv5065430, essv5072787, essv5048924, essv5011282, essv5042853, essv5020861, essv5120679, essv5015583, essv5056761, essv5050753, essv5101281, essv5086049, essv5119517, essv5046102, essv5159305, essv5081583, essv5138169, essv5160086, essv5043681, essv5063294, essv5011289, essv5055714, essv5084413, essv5039083, essv5137445, essv5018697, essv5113525, essv5064551, essv5159163, essv5088622, essv5134610, essv5146545, essv5071329, essv5096496, essv5043197, essv5023097, essv5109774, essv5125628, essv5111874, essv5036450, essv5101527, essv5078150, essv5069329, essv5014811, essv5031399, essv5074662, essv5159410, essv5133141, essv5087868, essv5070314, essv5061463, essv5135073, essv5114841, essv5066370, essv5082097, essv5009516, essv5106641, essv5033135, essv5056625, essv5021572, essv5115823, essv5076728, essv5069582, essv5124674, essv5131428, essv5112476, essv5120662, essv5105607, essv5128469 | | Samples | NA20588, NA19028, NA21636, NA20529, NA21683, NA21111, NA18621, NA19664, NA19399, NA18524, NA21099, NA12843, NA11920, NA18979, NA20512, NA21489, NA21457, NA17990, NA12146, NA19684, NA18152, NA18633, NA12750, NA21776, NA21434, NA19127, NA21378, NA10835, NA21359, NA20589, NA18995, NA18107, NA12336, NA20756, NA21479, NA11918, NA18582, NA20768, NA19650, NA12762, NA17983, NA20291, NA18136, NA21574, NA19720, NA07014, NA18160, NA10850, NA21523, NA19796, NA18102, NA20757, NA19985, NA19921, NA12760, NA20800, NA21587, NA19120, NA19056, NA21448, NA20297, NA21596, NA18674, NA19184, NA20810, NA19663, NA19176, NA19751, NA21631, NA20875, NA18572, NA21438, NA18981, NA12234, NA19064, NA18537, NA20903, NA19671, NA19142, NA11893, NA21112, NA11840, NA19750, NA18122, NA18532, NA12145, NA19009, NA18141, NA19682, NA19318, NA12778, NA10856, NA21316, NA21608, NA18108, NA19652, NA18702, NA18517, NA21144, NA18863, NA19712, NA19434, NA18628, NA21528, NA20909, NA20520, NA21768, NA19010, NA19470, NA19360, NA12347, NA20897, NA19117, NA21435, NA19705, NA18631, NA19223, NA18134, NA18609, NA19770, NA18138, NA21384, NA20345, NA19129, NA21487, NA18612, NA19429, NA19431, NA18577, NA20772, NA21403, NA18497, NA20284, NA19237, NA20290, NA19700, NA21477, NA18924, NA19466, NA11995, NA20292, NA12767, NA18166, NA21476, NA19763, NA18561, NA19704, NA18507, NA18599, NA17975, NA12045, NA21115, NA19098, NA18526, NA18962, NA12341, NA19068, NA19746, NA12812, NA20890, NA18635, NA18860, NA20769, NA19649, NA20540, NA12287, NA19054, NA18498, NA19038, NA12761, NA18749, NA12282, NA21382, NA20349, NA20340, NA19371, NA21525, NA19075, NA19471, NA18131, NA12889, NA19159, NA21825, NA21716, NA19725, NA19189, NA18520, NA21601, NA21362, NA19665, NA18973, NA18150, NA18638, NA20129, NA20818, NA19007, NA18106, NA19247, NA19657, NA20858, NA20524, NA12753, NA12342, NA10863, NA19347, NA12872, NA19748, NA18991, NA19788, NA19097, NA18682, NA19776, NA18133, NA19000, NA07031, NA20859, NA18499, NA19031, NA20881, NA19001, NA19772, NA18853, NA20282, NA20828, NA19756, NA21583, NA19160, NA18536, NA21142, NA21521, NA18576, NA21143, NA11882, NA19183, NA18162, NA12864, NA12775, NA07051, NA21616, NA21733, NA21647, NA21517, NA21615, NA19310, NA10861, NA20803, NA19193, NA21094, NA21619, NA20887, NA21125, NA19790, NA19759, NA19376, NA19109, NA19438, NA20582, NA19472, NA19173, NA21101, NA12830, NA21486, NA19726, NA17988, NA21385, NA18696, NA19146, NA20907, NA18148, NA10864, NA19153, NA20509, NA20882, NA19701, NA12842, NA19703, NA21423, NA20766, NA12286, NA20508, NA18862, NA18861, NA12273, NA20783, NA18855, NA18935, NA20816, NA20752, NA20802, NA19350, NA18639, NA19359, NA18925, NA20332, NA18124, NA21301, NA20517, NA20364, NA20356, NA18510, NA12399, NA18627, NA18563, NA19373, 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| Known Genes | HLA-DRB1, HLA-DRB5, HLA-DRB6 | | Method | SNP array | | Analysis | To assess copy number variation we merged and analysed the probe level intensity data from both the Affymetrix and Illumina arrays. | | Platform | Not specified | | Comments | | | Reference | Altshuler_et_al_2010 | | Pubmed ID | 20811451 | | Accession Number(s) | esv2421657
| | Frequency | | Sample Size | 1184 | | Observed Gain | 0 | | Observed Loss | 1081 | | Observed Complex | 0 | | Frequency | n/a |
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