A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2421634



Internal ID7905396
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:55600413..55685533hg38UCSC Ensembl
Innerchr11:55367889..55453009hg19UCSC Ensembl
Innerchr11:55124465..55209585hg18UCSC Ensembl
Cytoband11q11
Allele length
AssemblyAllele length
hg3885121
hg1985121
hg1885121
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5025105, essv5079635, essv5009623, essv5019444, essv5003663, essv5032354, essv5090062, essv5014546, essv5032076, essv5127053, essv5089989, essv5069255, essv5131704, essv5140248, essv5012522, essv5133405, essv5122758, essv5071109, essv5033823, essv5007196, essv5151187, essv5022863, essv5033446, essv5123295, essv5136179, essv5014710, essv5015644, essv5153591, essv5026232, essv5120512, essv5126416, essv5084817, essv5057915, essv5044134, essv5080793, essv5157710, essv5103447, essv5087007, essv5125602, essv5106804, essv5095882, essv5015443, essv5132521, essv5014169, essv5036928, essv5059901, essv5024791, essv5093616, essv5054377, essv5082844, essv5155491, essv5082170, essv5064311, essv5142132, essv5152685, essv5007599, essv5024810, essv5141913, essv5128381, essv5016845, essv5122403, essv5007068, essv5008692, essv5015275, essv5031954, essv5056202, essv5144692, essv5146964, essv5006449, essv5112558, essv5071483, essv5025480, essv5150732, essv5052537, essv5007354, essv5114046, essv5012594, essv5044182, essv5046498, essv5062741, essv5157203, essv5120951, essv5029771, essv5032335, essv5115256, essv5132170, essv5030289, essv5079140, essv5127135, essv5086588, essv5155515, essv5111832, essv5134618, essv5088522, essv5160897, essv5121977, essv5040868, essv5019900, essv5021128, essv5150758, essv5157674, essv5003960, essv5009566, essv5014450, essv5090715, essv5015280, essv5085139, essv5026090, essv5008345, essv5030220, essv5123408, essv5104391, essv5131732, essv5048821, essv5070397, essv5020786, essv5065604, essv5075659, essv5137455, essv5064046, essv5079078, essv5151278, essv5159440, essv5018533, essv5157023, essv5100030, essv5027492, essv5131829, essv5015983, essv5018620, essv5137917, essv5142008, essv5016576, essv5088582, essv5028642, essv5017334, essv5050654, essv5151649, essv5040310, essv5017925, essv5146610, essv5015994, essv5021481, essv5113110, essv5118510, essv5137668, essv5067696, essv5117848, essv5086518, essv5060598, essv5009788, essv5016404, essv5025580, essv5153237, essv5007725, essv5019842, essv5084901, essv5106748, essv5051150, essv5013579, essv5086364, essv5157513, essv5093970, essv5114580, essv5034210, essv5155929, essv5118395, essv5024266, essv5028423, essv5151930, essv5022768, essv5111618, essv5111947, essv5117426, essv5146303, essv5026901, essv5083140, essv5045907, essv5130076, essv5024339, essv5033442, essv5051951, essv5087134, essv5017672, essv5148611, essv5087392, essv5137663, essv5093758, essv5104705, essv5014624, essv5033531, essv5146483, essv5081364, essv5089902, essv5115593, essv5022590, essv5018866, essv5057000, essv5053816, essv5090122, essv5099991, essv5058422, essv5148016, essv5148641, essv5080585, essv5004845, essv5124653, essv5066601, essv5105918, essv5040352, essv5084750, essv5090576, essv5024672, essv5019195, essv5046179, essv5037421, essv5047680, essv5037715, essv5142276, essv5063363, essv5095238, essv5109121, essv5115973, essv5099897, essv5007372, essv5045944, essv5053221, essv5148335, essv5096624, essv5113448, essv5096798, essv5015203, essv5034824, essv5056420, essv5073971, essv5101354, essv5048994, essv5007627, essv5083205, essv5107757, essv5116340, essv5020938, essv5036505, essv5078181, essv5155648, essv5033054, essv5070617, essv5104634, essv5031271, essv5081688, essv5139528, essv5008924, essv5089179, essv5131882, essv5140538, essv5071674, essv5111555, essv5003810, essv5086008, essv5013521, essv5156450, essv5004673, essv5151246, essv5137373, essv5122224, essv5158992, essv5029531, essv5053155, essv5144926, essv5008969, essv5102995, essv5027966, essv5108821, essv5058027, essv5028064, essv5042026, essv5068844, essv5095952, essv5152227, essv5160868, essv5020365, essv5092367, essv5079466, essv5081045, essv5126682, essv5052011, essv5102957, essv5122588, essv5110837, essv5089937, essv5092951, essv5024402, essv5032298, essv5150830, essv5033561, essv5052458, essv5054955, essv5072719, essv5117668, essv5028223, essv5053054, essv5060721, essv5099833, essv5037660, essv5114653, essv5112893, essv5004680, essv5029348, essv5104898, essv5117261, essv5134022, essv5113102, essv5006253, essv5074420, essv5076997, essv5128341, essv5046291, essv5060984, essv5122837, essv5077346, essv5065068, essv5151496, essv5011353, essv5142644, essv5084025, essv5133410, essv5147062, essv5052632, essv5017114, essv5069411, essv5091718, essv5142059, essv5038670, essv5098725, essv5132788, essv5126906, essv5116117, essv5062243, essv5123223, essv5003818, essv5056091, essv5079022, essv5027077, essv5034667, essv5079657, essv5156585, essv5070839, essv5049295, essv5055293, essv5056527, essv5064149, essv5082208, essv5073802, essv5002012, essv5111720, essv5078110, essv5113658, essv5115446, essv5004471, essv5101006, essv5045385, essv5100824, essv5133009, essv5022488, essv5048700, essv5121734, essv5082036, essv5009108, essv5003759, essv5064398, essv5054409, essv5014539, essv5098770, essv5128794, essv5134594, essv5045332, essv5081203, essv5080978, essv5084185, essv5025456, essv5043252, essv5098179, essv5115409, essv5062334, essv5158662, essv5011532, essv5039837, essv5135931, essv5014285, essv5017844, essv5060009, essv5125087, essv5019310, essv5053783, essv5047937, essv5158215, essv5037764, essv5014808, essv5058912, essv5103099, essv5028219, essv5063824, essv5118136, essv5087241, essv5123626, essv5147468, essv5025667, essv5121050, essv5127596, essv5071862, essv5115272, essv5119376, essv5081076, essv5130261, essv5046888, essv5059970, essv5073984, essv5103981, essv5144786, essv5054249, essv5089193, essv5023187, essv5027260, essv5158564, essv5093155, essv5141088, essv5079407, essv5104946, essv5135267, essv5005262, essv5112897, essv5150780, essv5155616, essv5021438, essv5085028, essv5003823, essv5064675, essv5120459, essv5159982, essv5076154, essv5016081, essv5085454, essv5119075, essv5110391, essv5003486, essv5037190, essv5078002, essv5041313, essv5103903, essv5109941, essv5143648, essv5160259, essv5002906, essv5046210, essv5082700, essv5083027, essv5062491, essv5031496, essv5060435, essv5024691, essv5087279, essv5014519, essv5046414, essv5031622, essv5096275, essv5059511, essv5003213, essv5127701, essv5055358, essv5119652, essv5140305, essv5025041, essv5155277, essv5063021, essv5105638, essv5067812, essv5012576, essv5091899, essv5056766, essv5117752, essv5066824, essv5027075, essv5067964, essv5086468, essv5065304, essv5154854, essv5141449, essv5151734, essv5152707, essv5045875, essv5082531, essv5095394, essv5030895, essv5055199, essv5079581, essv5056272, essv5119608, essv5003256, essv5059118
SamplesNA18642, NA17989, NA21634, NA11881, NA18621, NA07347, NA21512, NA17999, NA21441, NA18509, NA18616, NA21390, NA20527, NA20862, NA18630, NA19665, NA20907, NA19081, NA12342, NA07349, NA18966, NA21613, NA11920, NA21529, NA12347, NA20544, NA20796, NA18526, NA20535, NA10839, NA11918, NA17982, NA18859, NA19223, NA10847, NA18545, NA19186, NA17998, NA18128, NA19788, NA18529, NA21300, NA12828, NA18947, NA18134, NA18161, NA20292, NA17969, NA19379, NA21104, NA07348, NA20539, NA10855, NA18860, NA20805, NA20897, NA19685, NA19686, NA20277, NA19651, NA19257, NA19682, NA18156, NA21611, NA12766, NA18557, NA18745, NA20521, NA20853, NA18943, NA19761, NA18596, NA18628, NA18949, NA18868, NA19143, NA18139, NA17993, NA19077, NA19140, NA20896, NA20505, NA12763, NA18979, NA19085, NA20875, NA11839, NA11840, NA19076, NA12753, NA18150, NA18635, NA20811, NA18536, NA19675, NA19443, NA18623, NA19471, NA19107, NA20530, NA18617, NA18641, NA18592, NA19088, NA12761, NA18956, NA19908, NA10852, NA18609, NA21647, NA11831, NA11894, NA18138, NA20520, NA18916, NA21738, NA19181, NA21408, NA21094, NA12234, NA19086, NA21399, NA21491, NA19000, NA19055, NA20769, NA21442, NA19721, NA18144, NA19725, NA12239, NA12145, NA19080, NA07346, NA18149, NA18747, NA19129, NA19671, NA19771, NA17966, NA17988, NA18120, NA18633, NA19680, NA20760, NA18939, NA12348, NA19716, NA18131, NA20795, NA20910, NA21339, NA18968, NA12275, NA19005, NA19215, NA19002, NA19154, NA19664, NA21382, NA19139, NA21303, NA21485, NA18978, NA19237, NA20815, NA20797, NA21418, NA19720, NA10836, NA20766, NA18910, NA21336, NA19711, NA19789, NA19777, NA18940, NA19235, NA12891, NA18619, NA20525, NA18597, NA19669, NA21632, NA21476, NA19035, NA19723, NA18152, NA20276, NA21510, NA06991, NA18740, NA19193, NA19128, NA18857, NA19009, NA20518, NA20850, NA17975, NA21109, NA20873, NA21733, NA18631, NA19123, NA18544, NA21383, NA19818, NA10845, NA21576, NA12878, NA21089, NA18548, NA20810, NA18689, NA21436, NA20869, NA12248, NA20758, NA21597, NA20872, NA11829, NA19130, NA19756, NA12874, NA18112, NA19113, NA20804, NA18615, NA21387, NA12832, NA20538, NA21091, NA21302, NA12335, NA18555, NA19750, NA19007, NA19661, NA11917, NA17974, NA19065, NA19724, NA20279, NA12775, NA19058, NA19746, NA10864, NA18980, NA19659, NA21636, NA18105, NA18962, NA21617, NA07435, NA19142, NA18166, NA19137, NA19183, NA12827, NA19714, NA18122, NA18964, NA21520, NA18647, NA12718, NA12043, NA19152, NA19625, NA18861, NA21741, NA12750, NA20874, NA10843, NA12748, NA21490, NA11930, NA12344, NA18158, NA20522, NA20349, NA12802, NA21367, NA18561, NA21578, NA18933, NA18952, NA21517, NA20906, NA18148, NA18869, NA19783, NA18500, NA21307, NA20508, NA17990, NA19060, NA21404, NA18550, NA18570, NA18511, NA06989, NA12340, NA18993, NA20294, NA21487, NA18124, NA19203, NA20816, NA19718, NA19010, NA18573, NA20778, NA20786, NA19184, NA19782, NA18702, NA20900, NA12776, NA18157, NA18109, NA18524, NA20895, NA21295, NA18965, NA21489, NA17979, NA18488, NA18682, NA18704, NA19780, NA19467, NA20877, NA21368, NA20883, NA18626, NA10863, NA18632, NA18559, NA19726, NA19914, NA20761, NA20854, NA21309, NA12843, NA18998, NA20885, NA18624, NA19054, NA20819, NA21686, NA12282, NA20515, NA12336, NA19662, NA12383, NA18566, NA19057, NA19068, NA19660, NA18960, NA12864, NA18563, NA18618, NA21421, NA07357, NA20504, NA19722, NA18162, NA12762, NA12873, NA20783, NA12343, NA18118, NA18991, NA20801, NA18930, NA12814, NA20754, NA21582, NA18140, NA19658, NA19681, NA19056, NA19663, NA19679, NA19727, NA20892, NA21144, NA18643, NA20589, NA19684, NA19919, NA12006, NA19213, NA19676, NA21099, NA19790, NA21740, NA18537, NA19122, NA19653, NA19375, NA19103, NA20512, NA06985, NA21717, NA19784, NA18132, NA18875, NA19657, NA18151, NA20540, NA18977, NA18102, NA18749, NA19901, NA10850, NA21648, NA12872, NA18748, NA19175, NA19704, NA18564, NA18942, NA20774, NA19332, NA18613, NA20582, NA18997, NA19221, NA21475, NA18562, NA19074, NA17996, NA18125, NA17987, NA19318, NA20879, NA19902, NA20891, NA18543, NA20858, NA11832, NA19258, NA18582, NA18999, NA20581, NA18552, NA18599, NA18955, NA18911, NA19101, NA21420, NA19078, NA06984, NA12375, NA19683, NA10835, NA18129, NA17980, NA19719, NA21402, NA18971, NA18602, NA18577, NA20509, NA18146, NA18141, NA11992, NA12003, NA18946, NA19770, NA19781, NA19749, NA19063, NA21117, NA10838, NA18917, NA12399, NA20812, NA21405, NA21414, NA18571, NA19772, NA12817, NA19070, NA18611, NA20768, NA18532, NA21105, NA18935, NA20524, NA06994, NA20870, NA18913, NA12760, NA19448, NA20502, NA20772
Known GenesOR4C11, OR4C6, OR4P4, OR4S2
MethodSNP array
AnalysisTo assess copy number variation we merged and analysed the probe level intensity data from both the Affymetrix and Illumina arrays.
PlatformNot specified
Comments
ReferenceAltshuler_et_al_2010
Pubmed ID20811451
Accession Number(s)esv2421634
Frequency
Sample Size1184
Observed Gain0
Observed Loss499
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer