Variant DetailsVariant: esv2421359 | Internal ID | 8251807 | | Landmark | | | Location Information | | | Cytoband | 1q44 | | Allele length | | Assembly | Allele length | | hg38 | 57698 | | hg19 | 57698 | | hg18 | 57698 |
| | Variant Type | CNV deletion | | Copy Number | | | Allele State | | | Allele Origin | | | Probe Count | | | Validation Flag | | | Merged Status | M | | Merged Variants | | | Supporting Variants | essv5058655, essv5123318, essv5027476, essv5055017, essv5120633, essv5061991, essv5064700, essv5065925, essv5130565, essv5132902, essv5077425, essv5161202, essv5038198, essv5052053, essv5002108, essv5115152, essv5101288, essv5041796, essv5129943, essv5012841, essv5065509, essv5041335, essv5003841, essv5154198, essv5063441, essv5058111, essv5129150, essv5003191, essv5063897, essv5160478, essv5125705, essv5062898, essv5091485, essv5160251, essv5011649, essv5003472, essv5107103, essv5145516, essv5048692, essv5140044, essv5080664, essv5032071, essv5131334, essv5030451, essv5091748, essv5066001, essv5007543, essv5132447, essv5159986, essv5074845, essv5037471, essv5068686, essv5022198, essv5020890, essv5006833, essv5102650, essv5084864, essv5005910, essv5030485, essv5107029, essv5028578, essv5153990, essv5058818, essv5144547, essv5125237, essv5140830, essv5033254, essv5083127, essv5022524, essv5153388, essv5004723, essv5144789, essv5134117, essv5156203, essv5093794, essv5092614, essv5037221, essv5151709, essv5018175, essv5126178, essv5062619, essv5138532, essv5051993, essv5042703, essv5002553, essv5110593, essv5129030, essv5050378, essv5029695, essv5088570, essv5115592, essv5052279, essv5027081, essv5085311, essv5043614, essv5122374, essv5090585, essv5053750, essv5030218, essv5132043, essv5036668, essv5125086, essv5068973, essv5148458, essv5037832, essv5153078, essv5118084, essv5062993, essv5145685, essv5096319, essv5082006, essv5123287, essv5085030, essv5106828, essv5137891, essv5034319, essv5005650, essv5075998, essv5147948, essv5013017, essv5059168, essv5074138, essv5030156, essv5120185, essv5092325, essv5033980, essv5120045, essv5116647, essv5026076, essv5072211, essv5065864, essv5035008, essv5131955, essv5013772, essv5105324, essv5024371, essv5053031, essv5026906, essv5007881, essv5060184, essv5139049, essv5035902, essv5019962, essv5076900, essv5090838, essv5038668, essv5120285, essv5094439, essv5042138, essv5140666, essv5123259, essv5069474, essv5065934, essv5026927, essv5070591, essv5016509, essv5115664, essv5016362, essv5004573, essv5038484, essv5033269, essv5033538, essv5021158, essv5033670, essv5091698, essv5032053, essv5022184, essv5019774, essv5151778, essv5041438, essv5126338, essv5031539, essv5013677, essv5087721, essv5136619, essv5086297, essv5145010, essv5123521, essv5044737, essv5143061, essv5153434, essv5073467, essv5134615, essv5160632, essv5113296, essv5105534, essv5100548, essv5086942, essv5081358, essv5065266, essv5109296, essv5092824, essv5142477, essv5118382, essv5019912, essv5139919, essv5037281, essv5007616, essv5040163, essv5101846, essv5091351, essv5157348, essv5083273, essv5069137, essv5025650, essv5017100, essv5059233, essv5019398, essv5082298, essv5128329, essv5108365, essv5091265, essv5117558, essv5157783, essv5020643, essv5106860, essv5077692, essv5023091, essv5016082, essv5090674, essv5048163, essv5074592, essv5104325, essv5103933, essv5050749, essv5158889, essv5019482, essv5007657, essv5003287, essv5047249, essv5078026, essv5090019, essv5157558, essv5108480, essv5023997, essv5089205, essv5082727, essv5037748, essv5062467, essv5021496, essv5099983, essv5030024, essv5093605, essv5066684, essv5007575, essv5079513, essv5087834, essv5075036, essv5069259, essv5068652, essv5145185, essv5128857, essv5151797, essv5115707, essv5036357, essv5003147, essv5064953, essv5075816, essv5035114, essv5120231, essv5130767, essv5120876, essv5091685, essv5022897, essv5040772, essv5154959, essv5091210, essv5074083, essv5024210, essv5087376, essv5005560, essv5049719, essv5006756, essv5130044, essv5045275, essv5131199, essv5044193, essv5064679, essv5009380, essv5136453, essv5017623, essv5126939, essv5058181, essv5041542, essv5088257, essv5088349, essv5106270, essv5101009, essv5044203, essv5097020, essv5015117, essv5159867, essv5114866, essv5089647, essv5030161, essv5079809, essv5096828, essv5020619, essv5128823, essv5150504, essv5055572, essv5039407, essv5006978, essv5152258, essv5145024, essv5094953, essv5018986, essv5105652, essv5147790, essv5146280, essv5121075, essv5078870, essv5074922, essv5131682, essv5024015, essv5097752, essv5067089, essv5048158, essv5039518, essv5039021, essv5074800, essv5136644, essv5135654, essv5097257, essv5058592, essv5077147, essv5023038, essv5121400, essv5109259, essv5120275, essv5161209, essv5122598, essv5022752, essv5048778, essv5006818, essv5079112, essv5018049, essv5055863, essv5013422, essv5160367, essv5096709, essv5098606, essv5142939, essv5076150, essv5020827, essv5107766, essv5055728, essv5048855, essv5119741, essv5128527, essv5077491, essv5003970, essv5075145, essv5014996, essv5137355, essv5154728, essv5109985, essv5107574, essv5081548, essv5023399, essv5141066, essv5110738, essv5098948, essv5093982, essv5100891, essv5019645, essv5066145, essv5079794, essv5078935, essv5095742, essv5112617, essv5089759, essv5057479, essv5107978, essv5107901, essv5061637, essv5160671, essv5140515, essv5136252, essv5132616, essv5045899, essv5114761, essv5060873, essv5123320, essv5021783, essv5053264, essv5012245, essv5130632, essv5081416, essv5133073, essv5154342, essv5030909, essv5161177, essv5025893, essv5120971, essv5139361, essv5147700, essv5133721, essv5119660, essv5143053, essv5117760, essv5084075, essv5037494, essv5022716, essv5146763, essv5022848, essv5078030, essv5038509, essv5136566, essv5055175, essv5001965, essv5135664, essv5119985, essv5004671, essv5120983, essv5011248, essv5155280, essv5154881, essv5127742, essv5151698 | | Samples | NA19394, NA18745, NA19258, NA19701, NA20761, NA19028, NA18139, NA21317, NA21423, NA19909, NA12286, NA19664, NA19066, NA18508, NA18855, NA21100, NA18935, NA21352, NA19359, NA20294, NA21367, NA18925, NA12801, NA18504, NA20332, NA21408, NA21360, NA20364, NA20359, NA18510, NA12399, NA20806, NA18602, NA21739, NA19107, NA12813, NA17974, NA19127, NA19373, NA19171, NA18519, NA21378, NA17980, NA10854, NA21473, NA18107, NA20774, NA18923, NA20756, NA19686, NA18558, NA19062, NA11918, NA19457, NA17983, NA21353, NA20287, NA21381, NA21365, NA19904, NA19384, NA20291, NA19130, NA11930, NA21574, NA19041, NA12275, NA19720, NA21650, NA19123, NA21109, NA18868, NA19215, NA11994, NA18748, NA10850, NA19702, NA18966, NA19226, NA21523, NA19796, NA19239, NA21357, NA20342, NA21400, NA18867, NA18704, NA21105, NA20515, NA20335, NA19027, NA18645, NA20360, NA20904, NA18605, NA17976, NA21313, NA21414, NA21575, NA19120, NA19070, NA20297, NA19194, NA18674, NA12878, NA19161, NA18933, NA21300, NA20862, NA18871, NA19103, NA18572, NA18948, NA18534, NA20358, NA21366, NA12234, NA19208, NA19202, NA19654, NA21308, NA18573, NA12818, NA19142, NA19150, NA12386, NA18875, NA20581, NA12829, NA19151, NA18156, NA11840, NA21295, NA18930, NA19750, NA19154, NA18857, NA19656, NA12145, NA19718, NA19099, NA18555, NA18141, NA19452, NA21356, NA18127, NA12778, NA18570, NA19625, NA19375, NA18632, NA19652, NA21117, NA19440, NA19115, NA19149, NA18517, NA20276, NA19712, NA19434, NA21576, NA21528, NA20815, NA20870, NA21336, NA21368, NA20527, NA17989, NA21390, NA21582, NA20281, NA21388, NA21361, NA20888, NA19328, NA19223, NA19178, NA20871, NA18134, NA19185, NA19102, NA18873, NA19116, NA21722, NA19711, NA18872, NA17972, NA19121, NA18957, NA21363, NA19129, NA11892, NA19044, NA18670, NA21421, NA19429, NA19214, NA20898, NA20350, NA19676, NA18120, NA19141, NA20290, NA19222, NA19700, NA21686, NA18157, NA21477, NA21383, NA18924, NA19466, NA19249, NA11995, NA11829, NA10845, NA21620, NA20292, NA19914, NA12767, NA21519, NA21476, NA19122, NA18561, NA19704, NA21399, NA21092, NA17975, NA20813, NA18917, NA12045, NA19795, NA17966, NA19819, NA21723, NA21386, NA21115, NA20346, NA21693, NA11891, NA07357, NA21784, NA18967, NA19374, NA19660, NA18550, NA19201, NA20850, NA20890, NA20586, NA19119, NA18635, NA20317, NA18860, NA12891, NA19131, NA21401, NA19197, NA19313, NA19138, NA19054, NA18498, NA20288, NA20541, NA19038, NA18611, NA21402, NA12761, NA11917, NA12282, NA21447, NA19651, NA21382, NA19180, NA06984, NA20896, NA19917, NA19137, NA20340, NA19915, NA19371, NA19677, NA21525, NA21478, NA18131, NA20343, NA19159, NA20347, NA20811, NA19725, NA18520, NA21601, NA19721, NA19665, NA19445, NA18973, NA21320, NA18150, NA19451, NA19200, NA20818, NA21599, NA20854, NA21480, NA19247, NA19657, NA19437, NA18934, NA21682, NA10836, NA10863, NA19462, NA19152, NA18859, NA18515, NA19327, NA19236, NA20895, NA18516, NA18151, NA19788, NA18976, NA18682, NA19179, NA19221, NA07045, NA17977, NA19774, NA19000, NA07031, NA21141, NA20859, NA18518, NA21339, NA18499, NA17967, NA19031, NA21678, NA19113, NA12892, NA21578, NA12827, NA12817, NA19101, NA10852, NA19257, NA12766, NA06985, NA19756, NA19160, NA19095, NA18536, NA21521, NA19436, NA19035, NA21302, NA19685, NA19727, NA19308, NA18978, NA21113, NA21424, NA19206, NA18909, NA11881, NA21719, NA19321, NA20295, NA18559, NA12775, NA10859, NA19240, NA19174, NA19380, NA19144, NA21616, NA21733, NA19334, NA19919, NA19439, NA10861, NA19467, NA20797, NA19193, NA18869, NA21619, NA19085, NA18911, NA18594, NA20357, NA20333, NA21379, NA21364, NA19248, NA19438, NA21404, NA19472, NA19060, NA19828, NA21101, NA12830, NA21418, NA19726, NA21455, NA21312, NA19213, NA20528, NA21389, NA21385, NA21303, NA21509, NA18852, NA18505, NA18488, NA20322, NA19139, NA07000, NA21104, NA19046, NA20363, NA18622 | | Known Genes | OR2T10, OR2T11 | | Method | SNP array | | Analysis | To assess copy number variation we merged and analysed the probe level intensity data from both the Affymetrix and Illumina arrays. | | Platform | Not specified | | Comments | | | Reference | Altshuler_et_al_2010 | | Pubmed ID | 20811451 | | Accession Number(s) | esv2421359
| | Frequency | | Sample Size | 1184 | | Observed Gain | 0 | | Observed Loss | 420 | | Observed Complex | 0 | | Frequency | n/a |
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