Variant Details

Variant: esv2410192

Internal ID

8081303

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr6:50798254..50798551	hg38	UCSC Ensembl
Outer	chr6:50798058..50798754	hg38	UCSC Ensembl
Inner	chr6:50765967..50766264	hg19	UCSC Ensembl
Outer	chr6:50765771..50766467	hg19	UCSC Ensembl
Inner	chr6:50873926..50874223	hg18	UCSC Ensembl
Outer	chr6:50873730..50874426	hg18	UCSC Ensembl

Cytoband

6p12.3

Allele length

Assembly	Allele length
hg38	697
hg19	697
hg18	697

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv4645546

Samples

NA18507

Known Genes

Method

Sequencing

Analysis

Hierarchical clustering of anomalous readpairs was used to identify groupings of five or more readpairs that had a similar size and position. Read pairs were defined as anomalous if they had high-confidence alignments of each individual read that nevertheless were either incorrectly oriented or implied an insert size of at least 3 standard deviations outside the sample median.

Platform

Not specified

Comments

Reference

Bentley_et_al_2008

Pubmed ID

18987734

Accession Number(s)

esv2410192

Frequency

Sample Size	1
Observed Gain	0
Observed Loss	1
Observed Complex	0
Frequency	n/a