A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2403255



Internal ID8074366
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:46206660..46206804hg38UCSC Ensembl
Outerchr2:46206455..46207009hg38UCSC Ensembl
Innerchr2:46433799..46433943hg19UCSC Ensembl
Outerchr2:46433594..46434148hg19UCSC Ensembl
Innerchr2:46287303..46287447hg18UCSC Ensembl
Outerchr2:46287098..46287652hg18UCSC Ensembl
Cytoband2p21
Allele length
AssemblyAllele length
hg38555
hg19555
hg18555
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv4588142
SamplesNA18507
Known Genes
MethodSequencing
AnalysisHierarchical clustering of anomalous readpairs was used to identify groupings of five or more readpairs that had a similar size and position. Read pairs were defined as anomalous if they had high-confidence alignments of each individual read that nevertheless were either incorrectly oriented or implied an insert size of at least 3 standard deviations outside the sample median.
PlatformNot specified
Comments
ReferenceBentley_et_al_2008
Pubmed ID18987734
Accession Number(s)esv2403255
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer