Variant DetailsVariant: esv22688![](http://dgv.tcag.ca/gb2/gbrowse_img/dgv2_hg18/?name=chr10:96845996..97064746;width=800;overview=1) Internal ID | 11039921 | Landmark | | Location Information | | Cytoband | 10q23.33 | Allele length | Assembly | Allele length | hg38 | 218751 | hg19 | 218751 | hg18 | 218751 |
| Variant Type | CNV gain+loss | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | esv15160, esv15617, esv21432, esv9778, esv11975 | Samples | NA18502, NA18508, NA19190, NA12156, NA12878, NA07045, NA11894, NA19099, NA19257, NA19225, NA18523, NA18858, NA19108, NA07037, NA18505, NA18511 | Known Genes | C10orf129, PDLIM1, SORBS1 | Method | Oligo aCGH | Analysis | Segment log2 ratios from each sample. This was done running the GADA algorithm (Pique-Regi et al., 2008) using the options "-M 10 -T 10 -a 2.5". Filter non-CNV segments using intensity thresholds. Merge remaining CNV "calls" within each sample. Adjacent calls of the same direction (gain or loss) are merged if both: the distance between calls is less than 10kb, and the distance between calls is less than 10% of the size of the largest of the two calls. | Platform | Sanger H. Sapiens 42mCGH Array 5781_53 726K v1 | Comments | | Reference | Conrad_et_al_2009 | Pubmed ID | 19812545 | Accession Number(s) | esv22688
| Frequency | Sample Size | 40 | Observed Gain | 1 | Observed Loss | 15 | Observed Complex | 0 | Frequency | n/a |
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