Variant Details

Variant: esv2132532

Internal ID

7803644

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr2:108925109..108925161	hg38	UCSC Ensembl
Outer	chr2:108924930..108925336	hg38	UCSC Ensembl
Inner	chr2:109541565..109541617	hg19	UCSC Ensembl
Outer	chr2:109541386..109541792	hg19	UCSC Ensembl
Inner	chr2:108907997..108908049	hg18	UCSC Ensembl
Outer	chr2:108907818..108908224	hg18	UCSC Ensembl

Cytoband

2q12.3

Allele length

Assembly	Allele length
hg38	407
hg19	407
hg18	407

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv4522014

Samples

NA18507

Known Genes

EDAR

Method

Sequencing

Analysis

Hierarchical clustering of anomalous readpairs was used to identify groupings of five or more readpairs that had a similar size and position. Read pairs were defined as anomalous if they had high-confidence alignments of each individual read that nevertheless were either incorrectly oriented or implied an insert size of at least 3 standard deviations outside the sample median.

Platform

Not specified

Comments

Reference

Bentley_et_al_2008

Pubmed ID

18987734

Accession Number(s)

esv2132532

Frequency

Sample Size	1
Observed Gain	0
Observed Loss	1
Observed Complex	0
Frequency	n/a