A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2121214



Internal ID7445639
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:33673845..33673964hg38UCSC Ensembl
Outerchr22:33673671..33674161hg38UCSC Ensembl
Innerchr22:34069831..34069950hg19UCSC Ensembl
Outerchr22:34069657..34070147hg19UCSC Ensembl
Innerchr22:32399831..32399950hg18UCSC Ensembl
Outerchr22:32399657..32400147hg18UCSC Ensembl
Cytoband22q12.3
Allele length
AssemblyAllele length
hg38491
hg19491
hg18491
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv4674561
SamplesNA18507
Known GenesLARGE
MethodSequencing
AnalysisHierarchical clustering of anomalous readpairs was used to identify groupings of five or more readpairs that had a similar size and position. Read pairs were defined as anomalous if they had high-confidence alignments of each individual read that nevertheless were either incorrectly oriented or implied an insert size of at least 3 standard deviations outside the sample median.
PlatformNot specified
Comments
ReferenceBentley_et_al_2008
Pubmed ID18987734
Accession Number(s)esv2121214
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer