Variant Details

Variant: esv2027641

Internal ID

7698752

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr7:25017833..25020327	hg38	UCSC Ensembl
Outer	chr7:25017737..25020404	hg38	UCSC Ensembl
Inner	chr7:25057452..25059946	hg19	UCSC Ensembl
Outer	chr7:25057356..25060023	hg19	UCSC Ensembl
Inner	chr7:25023977..25026471	hg18	UCSC Ensembl
Outer	chr7:25023881..25026548	hg18	UCSC Ensembl

Cytoband

7p15.2

Allele length

Assembly	Allele length
hg38	2668
hg19	2668
hg18	2668

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

dgv36e194

Supporting Variants

essv4935578

Samples

NA18507

Known Genes

Method

Sequencing

Analysis

Hierarchical clustering of anomalous readpairs was used to identify groupings of five or more readpairs that had a similar size and position. Read pairs were defined as anomalous if they had high-confidence alignments of each individual read that nevertheless were either incorrectly oriented or implied an insert size of at least 3 standard deviations outside the sample median.

Platform

Not specified

Comments

Reference

Bentley_et_al_2008

Pubmed ID

18987734

Accession Number(s)

esv2027641

Frequency

Sample Size	1
Observed Gain	0
Observed Loss	1
Observed Complex	0
Frequency	n/a