Variant Details

Variant: esv1949347

Internal ID

7623917

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr8:107361524..107361652	hg38	UCSC Ensembl
Outer	chr8:107361363..107361836	hg38	UCSC Ensembl
Inner	chr8:108373752..108373880	hg19	UCSC Ensembl
Outer	chr8:108373591..108374064	hg19	UCSC Ensembl
Inner	chr8:108442928..108443056	hg18	UCSC Ensembl
Outer	chr8:108442767..108443240	hg18	UCSC Ensembl

Cytoband

8q23.1

Allele length

Assembly	Allele length
hg38	474
hg19	474
hg18	474

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv4520556

Samples

NA18507

Known Genes

ANGPT1

Method

Sequencing

Analysis

Hierarchical clustering of anomalous readpairs was used to identify groupings of five or more readpairs that had a similar size and position. Read pairs were defined as anomalous if they had high-confidence alignments of each individual read that nevertheless were either incorrectly oriented or implied an insert size of at least 3 standard deviations outside the sample median.

Platform

Not specified

Comments

Reference

Bentley_et_al_2008

Pubmed ID

18987734

Accession Number(s)

esv1949347

Frequency

Sample Size	1
Observed Gain	0
Observed Loss	1
Observed Complex	0
Frequency	n/a