Variant DetailsVariant: esv16756![](http://dgv.tcag.ca/gb2/gbrowse_img/dgv2_hg18/?name=chr7:143069709..143203524;width=800;overview=1) Internal ID | 11033990 | Landmark | | Location Information | | Cytoband | 7q35 | Allele length | Assembly | Allele length | hg38 | 133816 | hg19 | 133816 | hg18 | 133816 |
| Variant Type | CNV gain+loss | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | esv29816 | Supporting Variants | essv33915, essv78344, essv35853, essv60338, essv83528, essv74462, essv55291, essv68110, essv45261, essv64140 | Samples | NA18502, NA12004, NA19190, NA18907, NA07045, NA19099, NA06985, NA18523, NA18858, NA19129 | Known Genes | CTAGE6, FAM115A, LOC154761 | Method | Oligo aCGH | Analysis | Segment log2 ratios from each sample. This was done running the GADA algorithm (Pique-Regi et al., 2008) using the options "-M 10 -T 10 -a 2.5". Filter non-CNV segments using intensity thresholds. Merge remaining CNV "calls" within each sample. Adjacent calls of the same direction (gain or loss) are merged if both: the distance between calls is less than 10kb, and the distance between calls is less than 10% of the size of the largest of the two calls. | Platform | Sanger H. Sapiens 42mCGH Array 5781_53 726K v1 | Comments | | Reference | Conrad_et_al_2009 | Pubmed ID | 19812545 | Accession Number(s) | esv16756
| Frequency | Sample Size | 40 | Observed Gain | 6 | Observed Loss | 4 | Observed Complex | 0 | Frequency | n/a |
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