Variant DetailsVariant: esv11132![](http://dgv.tcag.ca/gb2/gbrowse_img/dgv2_hg18/?name=chr6:32093119..32099722;width=800;overview=1) Internal ID | 11028366 | Landmark | | Location Information | | Cytoband | 6p21.32 | Allele length | Assembly | Allele length | hg38 | 6604 | hg19 | 6604 | hg18 | 6604 |
| Variant Type | CNV gain+loss | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | esv28110 | Supporting Variants | essv42722, essv70644, essv49371, essv52008, essv32458, essv68088, essv76623, essv71641, essv53868, essv65967, essv57771, essv39229, essv59194, essv63496, essv44314, essv35679, essv35032 | Samples | NA18502, NA18508, NA18916, NA12287, NA11993, NA12489, NA18907, NA15510, NA19225, NA18858, NA18909, NA19108, NA19147, NA18517, NA19240, NA12006, NA18511 | Known Genes | C4A, C4B, C4B_2 | Method | Oligo aCGH | Analysis | Segment log2 ratios from each sample. This was done running the GADA algorithm (Pique-Regi et al., 2008) using the options "-M 10 -T 10 -a 2.5". Filter non-CNV segments using intensity thresholds. Merge remaining CNV "calls" within each sample. Adjacent calls of the same direction (gain or loss) are merged if both: the distance between calls is less than 10kb, and the distance between calls is less than 10% of the size of the largest of the two calls. | Platform | Sanger H. Sapiens 42mCGH Array 5781_53 726K v1 | Comments | | Reference | Conrad_et_al_2009 | Pubmed ID | 19812545 | Accession Number(s) | esv11132
| Frequency | Sample Size | 40 | Observed Gain | 1 | Observed Loss | 16 | Observed Complex | 0 | Frequency | n/a |
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