A curated catalogue of human genomic structural variation




Variant Details

Variant: essv9837868



Internal ID18768861
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:2029164..2308582hg38UCSC Ensembl
Innerchr8:1977327..2254637hg19UCSC Ensembl
Innerchr8:1964734..2242044hg18UCSC Ensembl
Cytoband8p23.2
Allele length
AssemblyAllele length
hg38279419
hg19277311
hg18277311
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3584560
Supporting Variants
Samples1WS
Known GenesMIR7160, MYOM2
MethodSNP array
AnalysisWe applied stringent filtering criteria such that CNV had to be a minimum of 1 kb and span 5 consecutive probes, and be detected by at least 2 out of the 3 algorithms. In addition we excluded CNVs that were on the X and Y-chromosomes, or approximately 300 kb adjacent to the centromeres and telomeres.
PlatformAffymetrix Genome-Wide Human SNP Array 6.0
Comments
ReferenceMokhtar_et_al_2014
Pubmed ID24956385
Accession Number(s)essv9837868
Frequency
Sample Size34
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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