A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7033237



Internal ID10360839
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:160611197..160612251hg38UCSC Ensembl
Innerchr6:161032229..161033283hg19UCSC Ensembl
Innerchr6:160952219..160953273hg18UCSC Ensembl
Cytoband6q26
Allele length
AssemblyAllele length
hg381055
hg191055
hg181055
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763605
Supporting Variants
SamplesSW_0847
Known GenesLPA
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7033237
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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