A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7032998



Internal ID10363975
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:94742546..94823620hg38UCSC Ensembl
Innerchr6:95452264..95533338hg19UCSC Ensembl
Innerchr6:95508985..95590059hg18UCSC Ensembl
Cytoband6q16.1
Allele length
AssemblyAllele length
hg3881075
hg1981075
hg1881075
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763963
Supporting Variants
SamplesSW_1090
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7032998
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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