A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7032621



Internal ID10012912
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:76730151..76751356hg38UCSC Ensembl
Innerchr6:77439868..77461073hg19UCSC Ensembl
Innerchr6:77496587..77517792hg18UCSC Ensembl
Cytoband6q14.1
Allele length
AssemblyAllele length
hg3821206
hg1921206
hg1821206
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763938
Supporting Variants
SamplesSW_0787
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7032621
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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