A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7032186



Internal ID10351781
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:65689589..65699027hg38UCSC Ensembl
Innerchr6:66399482..66408920hg19UCSC Ensembl
Innerchr6:66456203..66465641hg18UCSC Ensembl
Cytoband6q12
Allele length
AssemblyAllele length
hg389439
hg199439
hg189439
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763978
Supporting Variants
SamplesSW_0015
Known GenesEYS
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7032186
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer