A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7032175



Internal ID10369692
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:65689589..65697317hg38UCSC Ensembl
Innerchr6:66399482..66407210hg19UCSC Ensembl
Innerchr6:66456203..66463931hg18UCSC Ensembl
Cytoband6q12
Allele length
AssemblyAllele length
hg387729
hg197729
hg187729
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763978
Supporting Variants
SamplesSW_1318
Known GenesEYS
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7032175
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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