A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7032135



Internal ID10363907
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:65660459..65716750hg38UCSC Ensembl
Innerchr6:66370352..66426643hg19UCSC Ensembl
Innerchr6:66427073..66483364hg18UCSC Ensembl
Cytoband6q12
Allele length
AssemblyAllele length
hg3856292
hg1956292
hg1856292
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763978
Supporting Variants
SamplesSW_1088
Known GenesEYS
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7032135
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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