A curated catalogue of human genomic structural variation




Variant Details

Variant: essv7032074



Internal ID10017521
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:34755958..34919539hg38UCSC Ensembl
Innerchr6:34723735..34887316hg19UCSC Ensembl
Innerchr6:34831713..34995294hg18UCSC Ensembl
Cytoband6p21.31
Allele length
AssemblyAllele length
hg38163582
hg19163582
hg18163582
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2763967
Supporting Variants
SamplesSW_1097
Known GenesANKS1A, SNRPC, TAF11, UHRF1BP1
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv7032074
Frequency
Sample Size1109
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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